Files in jameshay218/serosim2

Infection time and antibody dynamics model

.Rbuildignore

.gitignore

.travis.yml

DESCRIPTION

Makefile

NAMESPACE

R/RcppExports.R R/analyses.R

R/analyses.R~

R/mcmc.R

R/mcmc.R~

R/mcmc_aux.R

R/mcmc_aux.R~

R/model.R

R/model.R~

R/package.R R/plots.R

R/plots.R~

R/test.R

R/test.R~

README.Rmd README.md

Rplot.svg

chains/A.png

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chains/C.png

chains/TRUE_data.csv

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chains/test_results.csv

man/SIRsim.Rd man/add_noise_func.Rd man/calculate_statistics.Rd man/convert_data_list_to_table.Rd man/convert_data_table_to_list.Rd man/cum_inc.Rd man/error_checks.Rd man/fluscape_data_manipulation.Rd man/generateIncCurve.Rd man/generate_infection_time.Rd man/generate_toy_inc.Rd man/generate_uniform_inc.Rd man/get_infection_ratios.Rd man/individual_simulation.Rd man/likelihood_titre.Rd man/multiple_strains.Rd man/overall_simulation.Rd man/plotSIR.Rd man/plot_serology.Rd man/save_all_data.Rd man/save_ini_pars.Rd man/seroconversion_check.Rd man/serosim2.Rd man/testFunc.Rd man/toUnitScale.Rd

model.png

src/RcppExports.cpp

src/model.cpp

src/model.cpp~

src/serosim2.so

src/testC.c

src/testCpp.cpp

src/testCpp.cpp~

tests/testthat.R tests/testthat/test.R working.R

jameshay218/serosim2 documentation built on May 18, 2019, 11:21 a.m.