vaccine_allocation_closure: closure to make vaccine allocation function

In jameshay218/vaxedemic: Optimal allocation of vaccination during a pandemic

Description

a closure to make a function which returns a vector of length n = n_countries * n_ages * n_risk_groups: the number of vaccines to be allocated to each location, age, risk group

Usage

vaccine_allocation_closure(user_specified_vax_alloc_func, travel_matrix,
  vax_allocation_params, labels)

Arguments

user_specified_vax_alloc_func	function to allocate vaccines given the arguments #' @param sum_age_risk_func: a function which sums a vector across age and risk groups #' (created in the closure) #' @param travel_matrix: see below #' @param vax_allocation_params: see below #' @param S: numeric vector of length n. number of unvaccinated susceptibles #' @param E: numeric vector of length n. number of unvaccinated exposed #' @param I: numeric vector of length n. number of unvaccinated infectious #' @param R: numeric vector of length n. number of unvaccinated recovered #' @param vax_pool: numeric vector of length 1. number of vaccines available
travel_matrix	square matrix with side length n_countries. travel_matrix[x,y] is the proportion of time an individual in location x spends in location y
vax_allocation_params	list of parameters for vaccine allocation
labels	data frame containing location, age and risk group corresponding to a vector element

Value

a function which returns a vector of length

jameshay218/vaxedemic documentation built on Jan. 30, 2020, 2:58 a.m.