create_scaling_matrices: Creates matrices for scaling CoMix by POLYMOD

In jarvisc1/CoMix: Functions for running the CoMix analyses

Description

Take two matrices split them if required to be of the same size and square Then take the ratio of the maximum eigenvalues

Usage

create_scaling_matrices(
  comix_survey,
  polymod_survey,
  nboots,
  matrices_path,
  file_name,
  age_limits = c(0, 5, 18, 30, 40, 50, 60, 70),
  age_limits_sym = c(18, 30, 40, 50, 60, 70),
  observed = FALSE,
  phys = FALSE,
  ...
)

Arguments

comix_survey	Survey object for CoMix.
polymod_survey	Survey object for POLYMOD.
matrices_path	File path where the matrices should be saved.
file_name	Name of file for multiple matrices to be save into.
observed	Logical parameter, defaulted to FALSE, for saving the observed contact matrices function.
phys	Logical parameter, defaulted to false, if true then only physical contacts are returned.
...	passed onto 'create_cm'phys Logical parameter, defaulted to false, if true then only physical contacts are returned.
split2	Logical parameter, defaulted to FALSE, for splitting the second matrix.

jarvisc1/CoMix documentation built on April 24, 2020, 2:06 a.m.