Description Usage Arguments Details Author(s) See Also Examples
The functions plot/tabulate the posterior distribution of TFR trajectories for a given country, or for all countries, including their median and given probability intervals.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 | tfr.trajectories.plot(tfr.pred, country, pi = c(80, 95),
half.child.variant = TRUE, nr.traj = NULL,
adjusted.only = TRUE, typical.trajectory = FALSE,
mark.estimation.points = FALSE,
xlim = NULL, ylim = NULL, type = 'b', xlab = 'Year', ylab = 'TFR',
main = NULL, lwd = c(2, 2, 2, 2, 2, 1),
col=c('black', 'green', 'red', 'red', 'blue', '#00000020'),
show.legend = TRUE, add = FALSE, ...)
tfr.trajectories.plot.all(tfr.pred,
output.dir = file.path(getwd(), 'TFRtrajectories'),
output.type = "png", main = NULL, verbose = FALSE, ...)
tfr.trajectories.table(tfr.pred, country, pi = c(80, 95),
half.child.variant = TRUE)
|
tfr.pred |
Object of class |
country |
Name or numerical code of a country. |
pi |
Probability interval. It can be a single number or an array. |
half.child.variant |
If |
nr.traj |
Number of trajectories to be plotted. If |
adjusted.only |
Logical. By default, if the projection median is adjusted using e.g. |
typical.trajectory |
Logical. If |
mark.estimation.points |
Logical. If |
xlim, ylim, type, xlab, ylab |
Graphical parameters passed to the |
lwd, col |
Vector of six elements giving the line width and color for: 1. observed data, 2. imputed missing data, 3. median, 4. quantiles, 5. half-child variant, 6. trajectories. |
show.legend |
Logical controlling whether the legend should be drawn. |
add |
Logical controlling whether the trajectories should be plotted into a new graphic device ( |
... |
Additional graphical parameters. In addition, for |
output.dir |
Directory into which resulting graphs are stored. |
output.type |
Type of the resulting files. It can be “png”, “pdf”, “jpeg”, “bmp”, “tiff”, or “postscript”. |
main |
Main title for the plot(s). In |
verbose |
Logical switching log messages on and off. |
tfr.trajectories.plot
plots posterior distribution of TFR trajectories for a given country. tfr.trajectories.table
gives the same output as a table. tfr.trajectories.plot.all
creates a set of graphs (one per country) that are stored in output.dir
.
The median and given probability intervals are computed using all available trajectories. Thus, nr.traj
does not influence those values - it is used only to control the number of trajectories plotted.
Hana Sevcikova, Leontine Alkema
1 2 3 4 5 6 7 | ## Not run:
sim.dir <- file.path(find.package("bayesTFR"), "ex-data", "bayesTFR.output")
pred <- get.tfr.prediction(sim.dir)
tfr.trajectories.plot(pred, country="Burkina Faso", pi=c(80, 95))
tfr.trajectories.table(pred, country="Burkina Faso", pi=c(80, 95))
## End(Not run)
|
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