Files in jaspershen/metIdentify
Metabolite identification based on MS1 and MS2 spectra

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DESCRIPTION

LICENSE

NAMESPACE

NEWS

NEWS.md R/curation_MS2_library.R R/data.R R/databaseConstruction.R R/fromZtoS.R R/function4metIdentifyClass.R R/getIdentificationTable.R R/metIdentify.R R/metIdentify4all.R R/metaboliteDatabase.R R/mySQL.R R/mzIdentify.R R/rtCorrection.R R/rtPrediction.R R/test2.R R/tools.R R/tools4MetaboliteIdentification.R README.md

data/hilic.pos.rda

data/hilic_neg.rda

data/msDatabase_hilic0.0.1.rda

data/msDatabase_rplc0.0.1.rda

data/rp.neg.rda

data/rp.pos.rda

docs/LICENSE-text.html

docs/LICENSE.html

docs/_config.yml

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docs/apple-touch-icon.png

docs/articles/database_construction.png

docs/articles/index.html

docs/articles/metIdentify.html

docs/articles/metIdentify_files/crosstalk-1.0.0/css/crosstalk.css

docs/articles/metIdentify_files/crosstalk-1.0.0/js/crosstalk.js

docs/articles/metIdentify_files/crosstalk-1.0.0/js/crosstalk.js.map

docs/articles/metIdentify_files/crosstalk-1.0.0/js/crosstalk.min.js

docs/articles/metIdentify_files/crosstalk-1.0.0/js/crosstalk.min.js.map

docs/articles/metIdentify_files/figure-html/unnamed-chunk-12-1.png

docs/articles/metIdentify_files/htmlwidgets-1.3/htmlwidgets.js

docs/articles/metIdentify_files/jquery-1.11.3/jquery-AUTHORS.txt

docs/articles/metIdentify_files/jquery-1.11.3/jquery.js

docs/articles/metIdentify_files/jquery-1.11.3/jquery.min.js

docs/articles/metIdentify_files/jquery-1.11.3/jquery.min.map

docs/articles/metIdentify_files/plotly-binding-4.9.0/plotly.js

docs/articles/metIdentify_files/plotly-htmlwidgets-css-1.46.1/plotly-htmlwidgets.css

docs/articles/metIdentify_files/plotly-main-1.46.1/plotly-latest.min.js

docs/articles/metIdentify_files/typedarray-0.1/typedarray.min.js

docs/articles/metabolite_identification.png

docs/authors.html

docs/docsearch.css

docs/docsearch.js

docs/docsearch.json

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docs/favicon.ico

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docs/man/figures/DP.PNG

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docs/man/figures/compound_information.PNG

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docs/man/figures/fragment_match_fraction.PNG

docs/man/figures/metabolite_identification.png

docs/man/figures/parameter_setting_MS_conventer.png

docs/man/figures/workflow_metIdentify.png

docs/news/index.html

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/databaseConstruction.html

docs/reference/figures/DP.PNG

docs/reference/figures/IS_table.PNG

docs/reference/figures/compound_information.PNG

docs/reference/figures/data_organization_for_metabolite_identification.PNG

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docs/reference/figures/fragment_match_fraction.PNG

docs/reference/figures/logo.png

docs/reference/figures/logo2.png

docs/reference/figures/metabolite_identification.png

docs/reference/figures/parameter_setting_MS_conventer.png

docs/reference/figures/workflow_metIdentify.png

docs/reference/filterIden.html

docs/reference/getIdenInfo.html

docs/reference/getIdentificationTable.html

docs/reference/getIdentificationTable1.html

docs/reference/getIdentificationTable2.html

docs/reference/getMS2spectrum.html

docs/reference/getMS2spectrum2Object.html

docs/reference/getParams.html

docs/reference/getParams2.html

docs/reference/hilic.neg.html

docs/reference/hilic.pos.html

docs/reference/index.html

docs/reference/metIdentify.html

docs/reference/metIdentify1.html

docs/reference/metIdentify4all.html

docs/reference/metIdentifyParam.html

docs/reference/ms2plot.html

docs/reference/msDatabase_hilic0.0.1.html

docs/reference/msDatabase_rplc0.0.1.html

docs/reference/mzIdentify.html

docs/reference/mzIdentify1.html

docs/reference/mzIdentifyParam.html

docs/reference/readMGF.html

docs/reference/readMSP.html

docs/reference/readMSP_MoNA.html

docs/reference/readMZXML.html

docs/reference/rp.neg.html

docs/reference/rp.pos.html

docs/reference/rtCor4database.html

docs/reference/trans2newStyle.html

docs/reference/whichHasIden.html

docs/sitemap.xml

inst/extdata/batch.design.csv

inst/unitTests/test_SXTpaste.R man/databaseConstruction.Rd

man/figures/DP.PNG

man/figures/IS_table.PNG

man/figures/compound_information.PNG

man/figures/data_organization_for_metabolite_identification.PNG

man/figures/database_construction.png

man/figures/fragment_match_fraction.PNG

man/figures/logo.png

man/figures/logo2.png

man/figures/metabolite_identification.png

man/figures/parameter_setting_MS_conventer.png

man/figures/workflow_metIdentify.png

man/filterIden.Rd man/getIdenInfo.Rd man/getIdentificationTable.Rd man/getIdentificationTable2.Rd man/getMS2spectrum.Rd man/getMS2spectrum2Object.Rd man/getParams.Rd man/getParams2.Rd man/hilic.neg.Rd man/hilic.pos.Rd man/metIdentify.Rd man/metIdentify4all.Rd man/metIdentifyParam.Rd man/ms2plot.Rd man/msDatabase_hilic0.0.1.Rd man/msDatabase_rplc0.0.1.Rd man/mzIdentify.Rd man/mzIdentifyParam.Rd man/readMGF.Rd man/readMSP.Rd man/readMSP_MoNA.Rd man/readMZXML.Rd man/rp.neg.Rd man/rp.pos.Rd man/rtCor4database.Rd man/trans2newStyle.Rd man/whichHasIden.Rd

metIdentify.Rproj

pkgdown/_pkgdown.yml

pkgdown/favicon/apple-touch-icon-120x120.png

pkgdown/favicon/apple-touch-icon-152x152.png

pkgdown/favicon/apple-touch-icon-180x180.png

pkgdown/favicon/apple-touch-icon-60x60.png

pkgdown/favicon/apple-touch-icon-76x76.png

pkgdown/favicon/apple-touch-icon.png

pkgdown/favicon/favicon-16x16.png

pkgdown/favicon/favicon-32x32.png

pkgdown/favicon/favicon.ico

vignettes/.gitignore

vignettes/database_construction.png

vignettes/metIdentify.Rmd

vignettes/metIdentify_cache/html/__packages

vignettes/metIdentify_cache/html/unnamed-chunk-11_e0d7bc48271890bd55616e52d0adcff5.rdb

vignettes/metIdentify_cache/html/unnamed-chunk-16_d1439df1ecd7d0824dc4e53a8e3a01c8.RData

vignettes/metIdentify_cache/html/unnamed-chunk-16_d1439df1ecd7d0824dc4e53a8e3a01c8.rdb

vignettes/metIdentify_cache/html/unnamed-chunk-16_d1439df1ecd7d0824dc4e53a8e3a01c8.rdx

vignettes/metabolite_identification.png

jaspershen/metIdentify documentation built on July 26, 2019, 8:54 a.m.

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jaspershen/metIdentify
Metabolite identification based on MS1 and MS2 spectra

Files in jaspershen/metIdentify
Metabolite identification based on MS1 and MS2 spectra

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jaspershen/metIdentify Metabolite identification based on MS1 and MS2 spectra

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jaspershen/metIdentify
Metabolite identification based on MS1 and MS2 spectra

Files in jaspershen/metIdentify
Metabolite identification based on MS1 and MS2 spectra