ms2Plot: ms2Plot

In jaspershen/sxtTools: All the usefull tools from Xiaotao Shen

Description

Plot ms2 spectrum.

Usage

ms2Plot(
  spectrum1,
  spectrum2,
  col1 = "lightseagreen",
  col2 = "tomato",
  col3 = "grey",
  xlim = NULL,
  lwd = 2,
  cex.lab = 1.8,
  cex.axis = 1.5,
  xlab = "m/z",
  ylab = "Relative intensity",
  real.int.cutoff = 0,
  ppm.ms2match = 30,
  bty = "o",
  xaxs = "r",
  yaxs = "r",
  ...
)

Arguments

spectrum1	Spectrum 1.
spectrum2	Spectrum 2.
col1	Color 1.
col2	Color 2.
col3	Color 3.
xlim	xlim.
lwd	lwd.
cex.lab	cex.lab.
cex.axis	cex.axis.
xlab	xlab.
ylab	ylab.
real.int.cutoff	real.int.cutoff.
ppm.ms2match	ppm.ms2match.
bty	bty
xaxs	xaxs
yaxs	yaxs
...	Other parameters.

Value

Return a MS2 spectrum.

Author(s)

Xiaotao Shen [e-mail]

jaspershen/sxtTools documentation built on May 2, 2020, 6:37 a.m.