Man pages for jcdterry/cassandRa
Finds Missing Links and Metric Confidence Intervals in Ecological Bipartite Networks
| CalcHostLevelCoverage | Estimated probabilities of missing links based on the host... |
| ComputeCI | Compute Basic Confidence Intervals |
| CoverageEstimator | Coverage Estimator, using Chao1 Index, Turing-Good or... |
| CreateListObject | Generates a network list from a food web |
| EcoLinkPredict | Predicting Missing Links |
| FitAllModels | Fit all the models |
| FitBothMandC | Fit Matching-Centrality Model |
| FitCentrality | Fit Centrality Model |
| FitMatching | Fit Latent Trait (Matching Model) |
| FitSBM | Fit SBM Model |
| grapes-greater-than-grapes | Pipe operator |
| make_true_and_sample_web | Make an artificial bipartite networks with some properties of... |
| Optimiser | Optimiser wrapper for network models |
| Optimise_SBM | Custom optimiser function for SBM models |
| PlotFit | Plot the fitted network models |
| PlotRarefaction | Plot Metric Response To Network Rarefaction |
| PredictLinks | Generates a network list from a food web and fits all network... |
| RarefyNetwork | Recalculate Network Metrics With Rarefied Webs |
| SortResponseCategory | Adds a dataframe that defines each interaction as true... |
| TestAllModels | Test the models by AUC |
| TestAUC | Test via AUC the predictive capacity of each model or... |
