FitCentrality: Fit Centrality Model
In jcdterry/cassandRa: Finds Missing Links and Metric Confidence Intervals in Ecological Bipartite Networks
Description
Usage
Arguments
Value
Description
Repeatedly fits a centrality model to a binary interaction network to return a probability matrix
Usage
1
2
FitCentrality(list, N_runs = 10, maxit = 10000,
method = "Nelder-Mead", ExtraSettings = NULL)
Arguments
list
Network List
N_runs
Number of start points to try. The best (maximum likelihood) half will be used to construct the probability matrix
maxit
Default = 10'000
method
Passed to optim, default = 'Nelder-Mead'
ExtraSettings
Other control settings to pass to optim()
Value
Network list with added 'C_par', best fitting parameters, C_ProbsMatrix, the probability matrix
jcdterry/cassandRa documentation built on July 3, 2019, 4:49 p.m.
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Description Usage Arguments Value
Description
Repeatedly fits a centrality model to a binary interaction network to return a probability matrix
Usage
1 2 | FitCentrality(list, N_runs = 10, maxit = 10000,
method = "Nelder-Mead", ExtraSettings = NULL)
|
Arguments
list |
Network List |
N_runs |
Number of start points to try. The best (maximum likelihood) half will be used to construct the probability matrix |
maxit |
Default = 10'000 |
method |
Passed to optim, default = 'Nelder-Mead' |
ExtraSettings |
Other control settings to pass to optim() |
Value
Network list with added 'C_par', best fitting parameters, C_ProbsMatrix, the probability matrix
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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