Man pages for jean997/jadeSims
| aggregate_sims | Aggregate simulations |
| alternatives_binomial | Run alternative methods for binomial simulations |
| alternatives_normal | Run alternative methods for normal simulations |
| avg_by_ct | Get average tpr and fpr rates over replicates. Align rates... |
| avg_by_interp | Get average tpr and fpr rates over replicates |
| binomial_data | Simulate binomial data from given read counts |
| generate_data_ar | Wrapper to generate normal auto-regressive data |
| generate_data_binomial | Wrapper to generate binomial data |
| generate_data_long | Wrapper to generate normal auto-regressive data with long... |
| generate_data_re | Wrapper to generate normal data with random effects |
| generate_data_short | Wrapper to generate normal data with short profiles |
| get_region_rates | Get average region level tpr and fpr from and agg object |
| normal_data | Simulate normal data |
| plot_rates2 | Plot ROC curves for simulations |
| plot_roc_curves | Plot ROC curves for simulations |
| run_jade_binomial | Run JADE for one binomial simulation |
| run_jade_normal | Run JADE for one normal simulation |
| tile_binomial_data | Simulate binomial data |
