Files in jefferis/elmr

Support for working with light and electron microscopy fly brain data

.Rbuildignore

.github/SUPPORT.md

.gitignore

.travis.yml

DESCRIPTION

LICENSE.md

NAMESPACE

NEWS.md R/contributions.R R/defunct.R R/elmr-data.R R/elmr-package.R R/fafb_mapper.R R/make_template.R R/meta_data.R R/nblast_fafb.R R/open_fafb.R R/unspike.R R/zzz.R README.md

_pkgdown.yml

cmtk_build.sh

data-raw/170211_new_ELM_landmarks_v7.csv

data-raw/170303_ELM_landmarks_v14.csv

data-raw/dense_core_neurons.R data-raw/landmarks.R data-raw/surfaces.R data-raw/templatebrains.R

data/FAFB.surf.rda

data/FAFB13.surf.rda

data/FAFB13NP.surf.rda

data/FAFB14.surf.rda

data/FAFB14NP.surf.rda

data/FAFBNP.surf.rda

data/dense_core_neurons.rda

data/elm.landmarks.12.rda

data/elm.landmarks.13.rda

data/elm.landmarks.rda

data/templatebrains.R

docs/404.html

docs/LICENSE.html

docs/SUPPORT.html

docs/articles/articles/multiple_somata.html

docs/articles/articles/multiple_somata_files/figure-html/unnamed-chunk-4-1.png

docs/articles/index.html

docs/articles/landmarks.html

docs/articles/landmarks_files/figure-html/unnamed-chunk-2-1.png

docs/articles/landmarks_files/figure-html/unnamed-chunk-4-1.png

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docs/articles/landmarks_files/figure-html/unnamed-chunk-9-1.png

docs/articles/making_meshes.html

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docs/articles/making_meshes_files/figure-html/unnamed-chunk-7-1.png

docs/articles/making_meshes_files/figure-html/unnamed-chunk-9-1.png

docs/articles/selecting_random_synapses.html

docs/articles/selecting_random_synapses_files/figure-html/unnamed-chunk-11-1.png

docs/articles/xform_brain.html

docs/articles/xform_brain_files/figure-html/unnamed-chunk-2-1.png

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docs/articles/xform_brain_files/figure-html/unnamed-chunk-7-1.png

docs/authors.html

docs/bootstrap-toc.css

docs/bootstrap-toc.js

docs/docsearch.css

docs/docsearch.js

docs/docsearch.json

docs/index.html

docs/jquery.sticky-kit.min.js

docs/link.svg

docs/news/index.html

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/FAFB.html

docs/reference/FAFB.surf.html

docs/reference/dense_core_neurons-1.png

docs/reference/dense_core_neurons.html

docs/reference/distal_to-1.png

docs/reference/distal_to.html

docs/reference/elm.landmarks.html

docs/reference/elmr-defunct.html

docs/reference/elmr-package.html

docs/reference/fafb_world_mapper.html

docs/reference/fetchn_fafb.html

docs/reference/index.html

docs/reference/nblast_fafb.html

docs/reference/open_fafb.html

docs/reference/plot3d.ngraph.html

docs/reference/prune_twigs-1.png

docs/reference/prune_twigs.html

docs/reference/simplify_neuron-1.png

docs/reference/simplify_neuron-2.png

docs/reference/simplify_neuron.html

docs/reference/stitch_neuron.html

docs/reference/stitch_neurons.html

docs/reference/summarise_contribution.html

docs/reference/tpsreg-1.png

docs/reference/tpsreg.html

docs/reference/unspike-1.png

docs/reference/unspike.html

elmr.Rproj

inst/WORDLIST

inst/elm/lm-em-landmarks.csv

man/FAFB.Rd man/FAFB.surf.Rd man/dense_core_neurons.Rd man/elm.landmarks.Rd man/elmr-defunct.Rd man/elmr-package.Rd man/fafb_hemilineage_contents.Rd man/fafb_world_mapper.Rd man/fetchn_fafb.Rd man/nblast_fafb.Rd man/open_fafb.Rd man/read.neurons.fafb.Rd man/summarise_contribution.Rd man/unspike.Rd tests/spelling.R tests/testthat.R tests/testthat/test-fetchn.R tests/testthat/test-ngraph.R tests/testthat/test-open_fafb.R tests/testthat/test-transforms.R tests/testthat/test-unspike.R

vignettes/.gitignore

vignettes/articles/.gitignore

vignettes/articles/multiple_somata.Rmd vignettes/landmarks.Rmd vignettes/making_meshes.Rmd vignettes/selecting_random_synapses.Rmd vignettes/xform_brain.Rmd

jefferis/elmr documentation built on Sept. 9, 2023, 1:54 p.m.