Man pages for jefferis/elmr
Support for working with light and electron microscopy fly brain data

dense_core_neuronsSample EM tracings (homologous pair of neurons wrapping...
distal_toReturn indices of points in a neuron distal to a given node
elm.landmarksELM Landmarks created by Bock & Saalfeld groups at Janelia
elmr-packageBridge light and EM flybrain datasets
FAFBtemplatebrain for assembled FAFB full adult female brain EM...
FAFB.surfFAFB brain and neuropil surface objects
fafb_world_mapperConvert coordinates between different FAFB assemblies
fetchn_fafbFetch neurons from FAFB catmaid server, transforming them as...
nblast_fafbNBLAST EM tracing against flycircuit (or other databases of)...
open_fafbOpen FAFB CATMAID in browser at a given XYZ location
simplify_neuronSimplify a neuron to include its root and two longest...
stitch_neuronStitch two neurons together at their closest endpoints
stitch_neuronsStitch multiple fragments into single neuron using nearest...
summarise_contributionSummarise tracer contributions / suggest authorship for set...
tpsregThin plate spline registrations via nat::xform and friends
unspikeRemove artefactual spikes in neuron tracing due to...
jefferis/elmr documentation built on Nov. 22, 2017, 4:32 a.m.