Man pages for jefferis/gphys
Analyse Electrophysiology Data Acquired by 'Neuromatic' / 'Igor Pro'
| AddLinesToRasterPlot | Add eg voltage traces to existing spike raster plot |
| as.mpsth | Convert a list of STAR psth objects into an mpsth object |
| as.repeatedTrain | Generic function to convert spikes to STAR as.repeatedTrain... |
| as.ts.mpsth | Convert a multi-psth list into a (multi) time series object |
| as.ts.psth | Convert a STAR psth into a (multi) time series object |
| CollectSpikesFromSweeps | Read in Igor Pro exported text file of Nclamp spike times |
| divide | Divide spiketimes object with multiple repeats into list with... |
| finder_colour | Query the colour label of a file in the MacOS X Finder |
| finder_colour_fast | Query the colour label of a file in the MacOS X Finder |
| fix.odd | Fix the odour labels in an odd config |
| gphys-package | Analyse electrophysiology data acquired by Neuromatic / Igor... |
| IgorWavesForSpikes | Find the Igor waves matching a set of spikes (even if... |
| is.spiketimes | Test if object is of class spiketimes |
| lifetime_sparseness | Calculate lifetime sparseness according to Olsen et al. 2008 |
| MakeAverageWaves | Make average (analogue) waves that match a spiketimes object |
| mean.mts | Take the mean of all the columns in a multi-time series (mts)... |
| merge.spiketimes | Merge two spiketimes lists with different ODD configs |
| OdourResponseFromSpikes | Produce table of spiking responses (optionally subtracting... |
| open-brace-psth | Extract one or more psth objects to make a new mpsth list |
| open-brace-spiketimes | Extract one or more spiketimes objects as a new spiketimes... |
| plot.mpsth | Plot PSTHs for multiple neurons (or multiple stimuli) |
| PlotOdourResponseFromSpikes | Boxplot of spikes within a window (optionally less a... |
| PlotRasterFromSweeps | Make a raster plot from a set of Nclamp sweeps recording... |
| plus-spiketimes | Combine multiple compatible spiketimes series (to plot as... |
| read.odd | Read in the ODD text file describing odour presentation... |
| scale.ts | Rescale the y values of a (multi-)time series (ts) object |
| set_finder_colour | Set the colour label of a file in the MacOS X Finder See... |
| smooth_decimate | Boxcar smooth and decimate a time series |
| smpsth | Generate smooth PSTHs for a set of spike trains |
| spiketimes | Make spiketimes object (spike times + stimulus info) from... |
| split.spiketimes | Split a spiketimes object with multiple repeats into list... |
| subset.spiketimes | Subset spiketimes object to contain only sweeps for an odour... |
| tsp.nclamppxp | Get time series properties for an Nclamp pxp file |
| tsp.psth | Find start, end and frequency of a STAR psth object Checks... |
