PlotOdourResponseFromSpikes: Boxplot of spikes within a window (optionally less a...

In jefferis/gphys: Analyse Electrophysiology Data Acquired by 'Neuromatic' / 'Igor Pro'

Description

Boxplot of spikes within a window (optionally less a baseline)

Usage

PlotOdourResponseFromSpikes(spiketimes, responseWindow,
  baselineWindow = NULL, freq = FALSE, PLOTFUN = stripchart, ...)

Arguments

spiketimes	list of spiketimes collected by CollectSpikesFromSweeps
responseWindow	vector of start and end time of odour response (in ms)
baselineWindow	vector of start and end time of baseline period (in ms)
freq	Plot spike rate in Hz rather than counts (default FALSE)
PLOTFUN	stripchart, boxplot or similar function (default stripchart)
...	Additional arguments passed on to PLOTFUN

Value

results of plotfun (if any)

Author(s)

jefferis

See Also

CollectSpikesFromSweeps

Other OdourResponse: OdourResponseFromSpikes

Examples

 
spikes=CollectSpikesFromSweeps(
  system.file('igor','spikes','nm20110914c4',package='gphys'),
  subdir='BLOCKI',sweeps=0:4)
## stripchart
PlotOdourResponseFromSpikes(spikes,c(2200,2700),c(0,2000),pch=19,method='jitter',
 col=1:6)
## boxplot, in Hz
PlotOdourResponseFromSpikes(spikes,c(2200,2700),c(0,2000),freq=TRUE,
 PLOTFUN=boxplot)

jefferis/gphys documentation built on June 5, 2019, 9:45 p.m.