extract_experimental_groups: Extract the experimental groups from ExpressionSet metadata
In jeffreyLbrabec/tinker: Tissue Network Knowledge Transfer
Description
Usage
Arguments
Value
Examples
View source: R/extract_experimental_groups.R
Description
Extract the experimental groups from ExpressionSet metadata
Usage
1
extract_experimental_groups(ExprSet = NULL, case_ctrl_col = NULL)
Arguments
ExprSet
S4 type object containing expression and meta data.
case_ctrl_col
String or character vector with the ExpressionSet column name containing
the Case/Control information.
Value
group, a character vector with each subsequent entry corresponding to a sample in the dataset.
Examples
1
2
3
gse <- download_gse_data("GSE108000")
group <- extract_experimental_groups(gse, "title")
jeffreyLbrabec/tinker documentation built on Nov. 4, 2019, 2:37 p.m.
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Description Usage Arguments Value Examples
View source: R/extract_experimental_groups.R
Description
Extract the experimental groups from ExpressionSet metadata
Usage
1 | extract_experimental_groups(ExprSet = NULL, case_ctrl_col = NULL)
|
Arguments
ExprSet |
S4 type object containing expression and meta data. |
case_ctrl_col |
String or character vector with the ExpressionSet column name containing the Case/Control information. |
Value
group, a character vector with each subsequent entry corresponding to a sample in the dataset.
Examples
1 2 3 | gse <- download_gse_data("GSE108000")
group <- extract_experimental_groups(gse, "title")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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