prep_positive: Transform NBS Data to Format Necessary for Exporting to ACNS...

In jesse-smith/covidsms: What the Package Does (One Line, Title Case)

Description

prep_positive() transforms data from NBS snapshot files to the format needed for exports to the ACNS process.

Usage

prep_positive(
  .data = load_positive(),
  filter_lab = TRUE,
  labs = c("AEL", "BAPTIST", "CCHS", "POPLAR", "UT"),
  filter_new = FALSE,
  filter_acns = filter_new,
  date = attr(.data, "date")
)

Arguments

.data	Data from NBS snapshot file
filter_lab	Should records from labs reported through the ACNS process be filtered out?
labs	Character vector of labs to filter; the default is all labs reporting directly to SCHD
filter_new	Should only new positives be returned? These are still de-duplicated across the full NBS dataset.
filter_acns	Should duplicates from previous ACNS files be removed?
date	The date attribute for the resulting date_tbl

Value

A date_tbl, which is a tibble with a date attribute

jesse-smith/covidsms documentation built on Dec. 25, 2021, 4:24 a.m.