extractXYdr: Interpret the "xydr" variable from Pheno-Evo model runs

In jessicaaudreylee/PhenoEvoR: Tools for analysis of NetLogo Pheno-Evo model results

Description

In Pheno-Evo, xydr is a property of a cell that is a list of the x-coordinate, the y-coordinate, and the degrade rate. These are reported together in order to enable spatial analysis of degrade rate values, which would not otherwise be possible because coordinate data would be separated from degrade rate data. [extractXYdr()] takes all the xydr values reported in one entry (one timepoint of one experiment) of a Pheno-Evo data table and separates them out into a new dataframe with appropriately labeled columns.

Usage

extractXYdr(charstring)

Arguments

charstring

The full character string from one entry in the xydir column of a NetLogo data table, including brackets and quotation marks.

Details

In general, the normal Pheno-Evo user should not have to use this function. It is called by several other functions used for analyzing Pheno-Evo output data, such as [degraderate.variogram()].

Value

A dataframe with three columns: xcor, ycor, and degrade.rate. Each row represents the data from one cell.

Examples

data(PE.ends)
PE.ends$xydr[4]
extractXYdr(PE.ends$xydr[4])

jessicaaudreylee/PhenoEvoR documentation built on Sept. 7, 2020, 3:50 a.m.