jfq3/RDPutils: R Utilities for Processing RDPTool Output

Parses OTU tables from RDP cluster files; associates OTU names with representative sequences; renames representative sequences with OTU names; converts RDP and USEARCH classifier outputs to phyloseq objects.

Getting started

Package details

AuthorJohn Quensen
MaintainerJohn Quensen <[email protected]>
LicenseGPL-2
Version1.4.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("jfq3/RDPutils")
jfq3/RDPutils documentation built on April 16, 2018, 3:12 p.m.