polar_graph: Plotting a polar graph

In jgalgarra/kcorebip: Bipartite networks kcore decomposition and visualization

Plotting a polar graph

Description

This function plots the polar graph of a bipartite network and the histograms of kshell kradius and kdegree

Usage

polar_graph(red, directorystr = "data/", plotsdir = "plot_results/polar/",
  print_to_file = FALSE, pshowtext = FALSE, show_histograms = TRUE,
  glabels = c("Plant", "Pollinator"), gshortened = c("pl", "pol"),
  lsize_title = 22, lsize_axis = 16, lsize_legend = 16,
  lsize_axis_title = 16, lsize_legend_title = 16, file_name_append = "",
  print_title = TRUE, progress = NULL, printable_labels = 0)

Arguments

red	the name of the file of the interaction matrix
directorystr	the directory where the red file is stored
plotsdir	the directory where the plot is stored
print_to_file	if set to FALSE the plot is displayed in the R session window
pshowtext	auxiliar for interactive apps, do not modify
show_histograms	display the histograms if set TRUE
glabels	guild labels
gshortened	guild shortened labels
lsize_title	title label size
lsize_axis	axis label size
lsize_legend	legend label size
lsize_axis_title	axis title size
lsize_legend_title	legend label size
file_name_append	a label that the user may append to the plot file name for convenience
print_title	show title and network parameters
progress	auxiliar for interactive apps, do not modify
printable_labels	range of labeled species

Examples

polar_graph("M_PL_007.csv","data/",plotsdir="grafresults/",print_to_file = TRUE)

jgalgarra/kcorebip documentation built on Jan. 12, 2024, 11:47 p.m.