Man pages for jhrcook/wext
Weighted Exclusivity Test (WExT)
| bipartite_edgelist | Transform between a bipartite graph and edge list |
| bipartite_edge_swap | Swap edges of a bipartite graph |
| bipartite_edge_swap2 | Swap edges of a bipartite graph (method 2) |
| bipartite_edge_swap3 | Swap edges of a bipartite graph (method 3) |
| calculate_events | Calculate the number of mutually exclusive or co-mutation... |
| calculate_row_col_exclusivity_weights | Calculate the weights for the Row-Column-Exclusivity test |
| calculate_row_exclusivity_weights | Calculate the weights for the Row-Exclusivity test |
| calculate_weighted_row_exclusivity_weights | Calculate the weights for the Weighted-Row-Exclusivity test |
| check_gr | Check that a node attribute exists for a graph |
| filter_by_mutation_frequency | Filter a bipartite graph's genes by number of mutations |
| get_node_index | Get the indices of nodes after evaluating 'expr' |
| make_sample_gene_bipartite | Make the sample-gene bipartite graph |
| matrix_to_tibble | Convert between a mutation matrix and tibble |
| random_edge_nodes | Return the nodes for a randomly selected edge |
| rc_test | The Row-Column-Exclusivity or Co-mutation test |
| remove_edge | Remove an edge |
| results_tracker | Initialize the mutation event tracker tibble |
| simple_dataset | Simple example data for WExT |
| swap_an_edge | Swap a single edge |
| swap_an_edge2 | Swap a single edge (method 2) |
| swap_an_edgeC | Swap a single edge (method 2 in C++) |
| wext | The Weighted-Exclusivity Test |
