detectObjects3: detect objects method3

In jianhong/cellCounter: cell counter

detect objects method3

Description

detect object, good for dense objects.

Usage

detectObjects3(
  img,
  offset = 0.1,
  objectSizeRange = c(50, 1000),
  size = 5,
  w = 40,
  h = 40,
  tolerance = 1,
  ext = 1,
  ...
)

Arguments

img	an object of Image or Image2.
offset, w, h	offset,w,h for thresh
objectSizeRange	numeric(2). object size range in pixel.
size	see makeBrush
tolerance, ext	see watershed.
...	not use.

Details

steps: 1. use watershed to segment the objects. 2. use bwlabel to label the objects 3. filter the objects by size range.

Value

an label Image.

Author(s)

Jianhong Ou

jianhong/cellCounter documentation built on June 10, 2022, 8 p.m.