Man pages for jianhong/cleanUpdTSeq
This package classifies putative polyadenylation sites as true or false/internally oligodT primed

BED2GRangesSeqBED2GRangesSeq
buildClassifierget Naive Bayes Classifier
buildFeatureVectorbuildFeatureVector
classifierAn object of class "naiveBayes" generated from...
cleanUpdTSeq-packageThis package classifies putative polyadenylation sites.
data.NaiveBayesTraining Data
featureVector-classClass '"featureVector"'
getDownstreamSequencegetDownstreamSequence
getUpstreamSequenceGet upstream sequences of the putative pA site
modelInfo-classClass '"modelInfo"'
naiveBayesClass '"naiveBayes"'
PASclassifier-classClass '"PASclassifier"'
predictTestSetpredictTestSet
jianhong/cleanUpdTSeq documentation built on Aug. 30, 2017, 12:45 a.m.