Constructing gene regulatory networks from expression data through functional module inference

Global functions | |
---|---|

assign_first_cluster | Source code |

assign_gene | Source code |

assign_regul | Source code |

build_module | Man page Source code |

build_moduleR | Man page Source code |

build_moduleR_heuristic | Man page Source code |

build_moduleR_heuristic2 | Source code |

build_split_table | Man page Source code |

calc_correlation | Source code |

calc_likelihood_score | Man page Source code |

calc_likelihood_vec | Source code |

compute_kld | Source code |

expand_xy | Source code |

extract_edges | Man page Source code |

get_correlation_list | Man page Source code |

get_group_kmeans | Source code |

get_leaf_group_labels | Source code |

get_range_potion | Source code |

get_row_order | Source code |

get_sample_cluster | Source code |

gnet | Man page Source code |

kneepointDetection | Man page |

multiplot | Source code |

plot_gene_group | Man page Source code |

plot_group_correlation | Man page Source code |

plot_tree | Man page Source code |

run_gnet | Source code |

save_gnet | Man page Source code |

similarity_score | Man page Source code |

similarity_score_ranked | Source code |

similarity_score_unranked | Source code |

sum_scores | Source code |

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