README.md
In jiho/ecotaxar: Read Information From EcoTaxa
ecotaxar
An R package to access data from EcoTaxa.
Installation
The package is not (yet?) on CRAN, so to install:
remotes::install_github("ecotaxa/ecotaxar")
Usage
Functions starting with api_ call EcoTaxa's API. This is still a work in progress and not all API endpoints are accessible.
Functions starting with db_ require direct access to the database, which is currently only possible from the internal network of the Laboratoire d'Océanographie de Villefranche (LOV).
A few other convenience functions are provided, to read .tsv files output by EcoTaxa and to handle a hierarchical taxonomy.
jiho/ecotaxar documentation built on Jan. 16, 2024, 12:26 a.m.
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ecotaxar
An R package to access data from EcoTaxa.
Installation
The package is not (yet?) on CRAN, so to install:
remotes::install_github("ecotaxa/ecotaxar")
Usage
Functions starting with api_ call EcoTaxa's API. This is still a work in progress and not all API endpoints are accessible.
Functions starting with db_ require direct access to the database, which is currently only possible from the internal network of the Laboratoire d'Océanographie de Villefranche (LOV).
A few other convenience functions are provided, to read .tsv files output by EcoTaxa and to handle a hierarchical taxonomy.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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