Man pages for jiho/ecotaxar
Read Information From EcoTaxa
| ancestors | Get the ids of all ancestors of some taxa |
| api_get_me | Get information about the currently authenticated user (i.e.... |
| api_get_user | Get information about a single user, by id |
| api_get_users | List all EcoTaxa users |
| api_handle_response | Handle an API response |
| api_login | Log in EcoTaxa |
| api_object | Get information about a single object |
| api_project | Get information for a project |
| api_project_create | Create a project |
| api_project_delete | Delete a project |
| api_projects_filter | Filter projects |
| api_project_update | Update information for a project |
| api_sample | Get information about a single sample |
| api_search_users | Search for users, by name |
| api_taxon | Get information about a single taxon |
| api_token | Read your EcoTaxa token |
| api_token_path | Get the path to your cached EcoTaxa token |
| api_update_object_set | Batch update metadata of objects |
| api_update_sample_set | Batch update metadata of samples |
| api_url | Get the base URL of EcoTaxa's API |
| api_user_preferences | Deal with user preferences |
| as.taxo | Coerce a taxonomy data.frame to various formats |
| children | Get ids of the children of some taxa |
| db_connect | Database connection to EcoTaxa |
| db_extract | Get objects and associated metadata |
| descendants | Get ids of descendants of some taxa |
| extract_taxo | Extract a subset of the taxonomy for a set of ids |
| is_leaf | Tests whether taxa are leaves in a taxonomic tree |
| lineage | Get the full lineage of a taxon |
| mapping | Parse a mapping specification |
| parent | Get id of the parent of some taxa |
| query_string | Build a query with parameters |
| read_ecotaxa_tsv | Read tsv file from EcoTaxa |
| reexports | Objects exported from other packages |
| remove_empty_cols | Remove empty columns from a data.frame |
| taxo | Minimal, fake taxonomy table |
| taxo_id | Get the ids of taxa from their names |
| taxo_name | Get the names of taxa from their ids |
| tbl_ecotaxa | Connect to common EcoTaxa tables |
