API for jimhester/primerTree
Visually Assessing the Specificity and Informativeness of Primer Pairs
| Global functions | |
|---|---|
| BLAST_primer | Source code |
| accession2taxid | Man page Source code |
| bryophytes_trnL | Man page |
| calc_rank_dist_ave | Man page Source code |
| clustalo | Man page |
| distance | Source code |
| enumerate_ambiguity | Source code |
| enumerate_primers | Source code |
| env2list | Source code |
| expand_arguments | Source code |
| fetch_taxonomy | Source code |
| filter_duplicates | Source code |
| filter_seqs | Man page Source code |
| filter_seqs.primerTree | Man page Source code |
| get_command_options | Source code |
| get_defaults | Source code |
| get_options | Source code |
| get_refresh_from_meta | Source code |
| get_sequence | Man page Source code |
| get_sequences | Man page Source code |
| get_taxonomy | Man page Source code |
| gglocator | Source code |
| identify.primerTree_plot | Man page Source code |
| labeled_quantile | Source code |
| layout_tree_ape | Man page Source code |
| mammals_16S | Man page |
| parsable_html | Source code |
| parse_LinkSet | Source code |
| parse_a | Source code |
| parse_attributes | Source code |
| parse_pre | Source code |
| parse_primer_hits | Man page Source code |
| parse_taxon | Source code |
| parse_taxonomy_xml | Source code |
| plot.primerTree | Man page Source code |
| plot_tree | Man page Source code |
| plot_tree_ranks | Man page Source code |
| primerTree | Man page |
| primerTree-package | Man page |
| primer_search | Man page Source code |
| print.primerTree | Source code |
| print.primerTree_plot_multi | Source code |
| print_options | Source code |
| retry | Source code |
| search_primer_pair | Man page Source code |
| seconds_elapsed_text | Source code |
| seq_lengths | Man page Source code |
| seq_lengths.primerTree | Man page Source code |
| summary.primerTree | Man page Source code |
| theme_noaxis | Source code |
| tree_from_alignment | Man page Source code |
