read_index_csv: Read indices of abundance

In jkbest2/spatq: Use spatially varying catchability to standardize fishery-dependent data

Read indices of abundance

Description

Read a CSV containing the true and estimated indices of abundance.

Usage

read_index_csv(
  filestudy,
  repl = NULL,
  opmod = NULL,
  estmod = NULL,
  root_dir = ".",
  estmods = c("survey", "spatial_ab", "spatial_q")
)

Arguments

filestudy	Either the file path or the study name
repl	Replicate number
opmod	Operating model number
estmod	Estimation model name
root_dir	Root directory
estmods	Names of estimation models to code column as a factor

Details

Includes true, estimated, and debiased estimates as well as error estimates.

Value

tibble with true and estimated indices of abundance

Author(s)

John K Best

jkbest2/spatq documentation built on Sept. 22, 2022, 3:22 a.m.