createThoraricSurgery: Create Thoraric Surgery dataset

In jkrijthe/createdatasets: Download and preprocess common benchmark dataset for use in reproduceable simulation studies

Description

From UCI: 1. DGN: Diagnosis - specific combination of ICD-10 codes for primary and secondary as well multiple tumours if any (DGN3,DGN2,DGN4,DGN6,DGN5,DGN8,DGN1) 2. PRE4: Forced vital capacity - FVC (numeric) 3. PRE5: Volume that has been exhaled at the end of the first second of forced expiration - FEV1 (numeric) 4. PRE6: Performance status - Zubrod scale (PRZ2,PRZ1,PRZ0) 5. PRE7: Pain before surgery (T,F) 6. PRE8: Haemoptysis before surgery (T,F) 7. PRE9: Dyspnoea before surgery (T,F) 8. PRE10: Cough before surgery (T,F) 9. PRE11: Weakness before surgery (T,F) 10. PRE14: T in clinical TNM - size of the original tumour, from OC11 (smallest) to OC14 (largest) (OC11,OC14,OC12,OC13) 11. PRE17: Type 2 DM - diabetes mellitus (T,F) 12. PRE19: MI up to 6 months (T,F) 13. PRE25: PAD - peripheral arterial diseases (T,F) 14. PRE30: Smoking (T,F) 15. PRE32: Asthma (T,F) 16. AGE: Age at surgery (numeric) 17. Risk1Y: 1 year survival period - (T)rue value if died (T,F)

Usage

createThoraricSurgery(file = getfilepath("thoraricsurgery.rds"),
  write = TRUE, read = TRUE)

Arguments

file	character; path/filename to write data file to
write	logical; should the dataset be written to disk for later use? (default: TRUE)
read	logical; should we try to read the dataset from the specified location first? (default: TRUE)

Details

Task: formula(Risk1Yr ~ .)

Value

The dataset as a data.table

References

Zieba, M., Tomczak, J. M., Lubicz, M., & 'Swikatek J. (2013). Boosted SVM for extracting rules from imbalanced data in application to prediction of the post-operative life expectancy in the lung cancer patients. Applied Soft Computing.

See Also

https://archive.ics.uci.edu/ml/datasets/Thoracic+Surgery+Data

jkrijthe/createdatasets documentation built on May 19, 2019, 12:44 p.m.