get_pubmed_abstracts: Abstracts and Document Information from PubMed

Description Usage Arguments Details Value See Also Examples

Description

get_pubmed_abstracts Returns information on abstracts of documents retrieved from PubMed

Usage

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get_pubmed_abstracts(query_string, retmax = 20)

Arguments

query_string

A string to be searched on PubMed

retmax

Maximum number of results returned

Details

get_pubmed_abstracts Takes a query string and returns a dataframe containing the text of the abstract and other information on documents returned from PubMed.

Value

A DataFrame.

See Also

article_to_df

Examples

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query_string <- gene expression cancer"
abstracts_df <- get_pubmed_abstracts(query_string)
abstracts_df$abstract[1] <- "Membrane type-1 matrix metalloproteinase (MT1-MMP) possesses....

jlee118/tmine documentation built on May 15, 2019, 9:14 p.m.