rnx_auc_embed: Area Under the RNX Curve

View source: R/neighbor.R

rnx_auc_embedR Documentation

Area Under the RNX Curve

Description

The RNX curve is formed by calculating the rnx_crm metric for different sizes of neighborhood. Each value of RNX is scaled according to the natural log of the neighborhood size, to give a higher weight to smaller neighborhoods. An AUC of 1 indicates perfect neighborhood preservation, an AUC of 0 is due to random results.

Usage

rnx_auc_embed(din, dout)

Arguments

din

Input distance matrix.

dout

Output distance matrix.

Value

Area under the RNX curve.

References

Lee, J. A., Peluffo-Ordo'nez, D. H., & Verleysen, M. (2015). Multi-scale similarities in stochastic neighbour embedding: Reducing dimensionality while preserving both local and global structure. Neurocomputing, 169, 246-261.


jlmelville/sneer documentation built on Nov. 15, 2022, 8:13 a.m.