maplot: A Function to make MA plots from all arrays.
In jmacdon/affycoretools: Functions useful for those doing repetitive analyses with Affymetrix GeneChips
maplot R Documentation
A Function to make MA plots from all arrays.
Description
This function creates an MA plot for all arrays in either an ExpressionSet
or a matrix. A 'baseline' array is created using the median expression for
each gene, and each array is then compared to the baseline array.
Usage
maplot(object)
Arguments
object
An ExpressionSet or matrix containing log-transformed array
data.
Value
No output. Used only for the side effect of creating MA plots.
Author(s)
James W. MacDonald <jmacdon@u.washington.edu>
jmacdon/affycoretools documentation built on Nov. 2, 2024, 1:29 a.m.
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| maplot | R Documentation |
A Function to make MA plots from all arrays.
Description
This function creates an MA plot for all arrays in either an ExpressionSet or a matrix. A 'baseline' array is created using the median expression for each gene, and each array is then compared to the baseline array.
Usage
maplot(object)
Arguments
object |
An ExpressionSet or matrix containing log-transformed array data. |
Value
No output. Used only for the side effect of creating MA plots.
Author(s)
James W. MacDonald <jmacdon@u.washington.edu>
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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