plotDeg: Functions to Plot Density and RNA Degradation Plots

Description Usage Arguments Value Author(s) Examples

View source: R/affystart.R

Description

These functions make density and RNA degradation plots with automatic placement of legends.

Usage

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plotDeg(dat, filenames = NULL)

Arguments

dat

An AffyBatch object, or in the case of plotHist, a matrix (e.g., from a call to read.probematrix. Note that plotDeg requires an AffyBatch object to work correctly.

filenames

Filenames that will be used in the legend of the resulting plot. If NULL (the default), these names will be extracted from the sampleNames slot of the AffyBatch object.

Value

These functions are called only for the side effect of making the plots. Nothing else is returned.

Author(s)

James W. MacDonald <[email protected]>

Examples

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library("affydata")
data(Dilution)
plotDeg(Dilution)
plotHist(Dilution)

jmacdon/affycoretools documentation built on July 28, 2018, 9:30 p.m.