Man pages for jmbuhr/ShinyLipids
ShinyLipids
| addLipidProperties | Add Lipid properties |
| collectLipidClassOrder | Lipid Class Order |
| collectMetaData | Collect metadata from database |
| collectRawData | Collect raw data from database |
| createDatabase | Create your own database |
| createHeatmap | Create a Heatmap from data |
| createMainPlot | Create the main plot |
| createPcaPrep | Create prepped pca recipe |
| createPlotData | Create the data ready for plotting |
| createQueryForID | Generate SQL Query for the selected dataset |
| createWideData | Create wide data |
| defaultInput | Generate list of default options |
| doAllPairwiseComparisons | Test all possible pairwise t-tests |
| filterIfNotNull | Filter if not null |
| filterRawDataFor | Filter raw data |
| imputeMissingIf | Impute implicit missing values as 0 |
| mainScale | Create color scale |
| mainTheme | mainTheme |
| parseDate | Make a date |
| pipe | Pipe operator |
| run_app | Run the Shiny Application |
| standardizeWithin | Standardize raw data |
| standardizeWithinTechnicalReplicatesIf | Standardize data within technical replicates |
| summarisePlotData | Summarise the plot data |
| testAllMoreThanOneReplicate | Test that all samples have more than one replicate |
| testPairwise | Pairwise t-tests |
| updateAllRangeInputs | Custom update range input |
| updateAllSelectizeInputs | Custom update selectize input |
