gsubs: Pattern replacement with multiple patterns

In jmw86069/jamenrich: Analysis and Visualization of Multiple Gene Set Enrichments

Pattern replacement with multiple patterns

Description

Pattern replacement with multiple patterns

Usage

gsubs(
  pattern,
  replacement,
  x,
  ignore.case = TRUE,
  replaceMultiple = rep(TRUE, length(pattern)),
  ...
)

Arguments

pattern	character vector of patterns
replacement	character vector of replacements
x	character vector with input data to be curated
ignore.case	logical indicating whether to perform pattern matching in case-insensitive manner, where ignore.case=TRUE will ignore the uppercase/lowercase distinction.
...	additional arguments are passed to base::gsub() or base::sub().
replace_multiple	logical vector indicating whether to perform global substitution, where replace_multiple=FALSE will only replace the first occurrence of the pattern, using base::sub(). Note that this vector can refer to individual entries in pattern.

Details

This function is a simple wrapper around base::gsub() when considering a series of pattern-replacement combinations. It applies each pattern match and replacement in order and is therefore not vectorized.

See Also

Other jam utility functions: avg_angles(), avg_colors_by_list(), call_fn_ellipsis_deprecated(), cell_fun_bivariate(), collapse_mem_clusters(), colorRamp2D(), deconcat_df2(), display_colorRamp2D(), enrichList2geneHitList(), filter_mem_genes(), filter_mem_sets(), find_colname(), get_igraph_layout(), handle_igraph_param_list(), isColorBlank(), make_legend_bivariate(), make_point_hull(), mem_find_overlap(), order_colors(), rank_mem_clusters(), rotate_coordinates(), subgraph_jam(), subset_mem(), summarize_node_spacing(), xyAngle()

jmw86069/jamenrich documentation built on Feb. 3, 2024, 12:40 p.m.