Description Usage Arguments Value Examples
deg_volcano
will draw a volcano for you.
1 | deg_volcano(need_deg, style = 1, p_thred = 0.05, logFC_thred = 1)
|
need_deg |
should be 3 columns : gene, logFC, p.value(or p.adjust |
style |
you can try 1 or 2, default: 1 |
p_thred |
default:0.05 |
logFC_thred |
default:1 |
a ggplot2 style figure.
1 2 3 4 | deg=GSE27533$DEG
need_deg=data.frame(symbols=rownames(deg), logFC=deg$logFC, p=deg$P.Value)
deg_volcano(need_deg,1)
deg_volcano(need_deg,2)
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