Description Usage Arguments Value Examples
It'll random choose the same number of gene with the size of this geneSet to extract the expression matrix and then do PCA for this small expression matrix .
1 | PCA_gene_single(prefix = "test", exprSet, this_geneSet, n = 1000)
|
prefix |
The prefix for all of the output files.( we don't need it now actually,just placeholder) |
exprSet |
Matrix for microarray expression values,rownames must be genes, colnames must be samples |
this_geneSet |
A vector which contains all of the genes in this geneSet. |
n |
Times for random permuted or bootstraps by genes,default:1000 |
The p vaule for this PCA test
1 | PCA_gene_single(exprSet=exprSet,this_geneSet=this_geneSet)
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.