Files in jmzobitz/SoilModeling

.DS_Store
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/arrhenius.R R/dead_soil.R R/hello.R R/initialize.R R/likelihood.R R/mcmc_treatment.R R/metropolis_chain.R R/microbes.R R/prior.R R/run_MCMC.R R/sample_parameters.R
SoilModeling.Rproj
code-graveyard/empirical-tests.R code-graveyard/linear-test-functions.R code-graveyard/linear-test.R data-process/data-prepare.R
data-process/data-process.txt
data-process/enzyme-analysis.R data-process/mcmc-defaults.R
data-raw/.DS_Store
data-raw/AMF_USNR1_2007_L2_GF_V009 (1).csv
data-raw/AMF_USNR1_2007_L2_GF_V009.csv
data-raw/AMF_USNR1_2008_L2_GF_V009.csv
data-raw/AMF_USNR1_2014_L2_GF_V009.csv
data-raw/GLOBAL_SRDB_V3_1235/.DS_Store
data-raw/GLOBAL_SRDB_V3_1235/Icon
data-raw/GLOBAL_SRDB_V3_1235/comp/Icon
data-raw/GLOBAL_SRDB_V3_1235/comp/calculations_worksheets_v3.zip
data-raw/GLOBAL_SRDB_V3_1235/comp/global_srdb_v3.pdf data-raw/GLOBAL_SRDB_V3_1235/comp/srdb.R
data-raw/GLOBAL_SRDB_V3_1235/data/Icon
data-raw/GLOBAL_SRDB_V3_1235/data/srdb-data-V3.csv
data-raw/GLOBAL_SRDB_V3_1235/data/srdb-studies-V3.csv
data-raw/GLOBAL_SRDB_V3_1235/guide/Icon
data-raw/GLOBAL_SRDB_V3_1235/guide/Online_Version_global_srdb_v3.html
data-raw/GLOBAL_SRDB_V3_1235/guide/global_srdb_v3.html
data-raw/HighPark_BGCpools_MASTER_README.txt
data-raw/HighPark_BGCpools_MASTER_r.csv
data-raw/MASTERPLOT_DISTURBANCE_INFO.csv
data-raw/MASTERPLOT_DISTURBANCE_INFO_README.txt
data-raw/MicrobialExoEnzymeActivities_COMASTER_README.csv
data-raw/MicrobialExoEnzymeActivities_COMASTER_README.txt
data-raw/NOTES ON PLOT AND DISTURBANCE CODES.txt
data-raw/PyrolysisAllSitesRelativeProportions_MASTER.csv
data-raw/PyrolysisAllSitesRelativeProportions_MASTER_README.txt
data-raw/RAPD2013_MasterFluxesREADME.txt
data-raw/RAPID2013_MasterFluxes.csv
data-raw/climate_2000_ver.2015.11.10.csv
data-raw/climate_2000_ver.2015.11.10.dat
data-raw/climate_2012_ver.2015.11.10.csv
data-raw/climate_2014_ver.2015.11.10.dat
data-raw/niwotGPP.out
data/Q10_temperature.rda
data/flux_data.rda
data/mcmc_defaults.rda
data/mcmc_superfast.rda
data/microbe_data.rda
data/rapid_data.rda
data/split_data_weighted.rda
data/treatment_key.rda
man/arrhenius.Rd man/dead_soil.Rd man/hello.Rd man/initialize.Rd man/likelihood.Rd man/mcmc_treatment.Rd man/metropolis_chain.Rd man/microbes.Rd man/prior.Rd man/run_MCMC.Rd man/sample_parameters.Rd
manuscript-figures/arrhenius-histograms.png
manuscript-figures/dead_soil-histograms.png
manuscript-figures/microbes-histograms.png
manuscript-figures/q10EnzymeSummary.png
manuscript-figures/q10ProportionEnzymeSummary.png
mcmc-log-files/arrhenius-1.out
mcmc-log-files/arrhenius-2.out
mcmc-log-files/arrhenius-3.out
mcmc-log-files/arrhenius-4.out
mcmc-log-files/dead_soil-1.out
mcmc-log-files/dead_soil-2.out
mcmc-log-files/dead_soil-3.out
mcmc-log-files/dead_soil-4.out
mcmc-log-files/microbes-1.out
mcmc-log-files/microbes-2.out
mcmc-log-files/microbes-3.out
mcmc-log-files/microbes-4.out
mcmc-process/dead_soil_process.R mcmc-process/parameter_distribution.R
mcmc-results/arrhenius-1.Rda
mcmc-results/arrhenius-2.Rda
mcmc-results/arrhenius-3.Rda
mcmc-results/arrhenius-4.Rda
mcmc-results/dead_soil-1.Rda
mcmc-results/dead_soil-2.Rda
mcmc-results/dead_soil-3.Rda
mcmc-results/dead_soil-4.Rda
mcmc-results/microbes-1.Rda
mcmc-results/microbes-2.Rda
mcmc-results/microbes-3.Rda
mcmc-results/microbes-4.Rda
param-defaults/arrhenius-param.csv
param-defaults/dead_soil-param.csv
param-defaults/linear-param.csv
param-defaults/microbes-param.csv
param-defaults/quality-param.csv
jmzobitz/SoilModeling documentation built on March 29, 2019, 12:17 a.m.