run_MCMC
Does a complete MCMC parameter estimation
1 2 | run_MCMC(param_file_name, model_in, data_in, join_key, results_file_name,
out_file_name, mcmc_parameters)
|
param_file_name |
file name (as a string) of where the default parameters are located |
model_in |
the name of the model we are using |
data_in |
input data we use to compare in the likelihood function. |
join_key |
The name of the variable we will join to data_in when doing likelihood |
results_file_name |
The file name (as a string) where the final MCMC results will be stored. |
out_file_name |
The file name (as a string) where we log various info as the mcmc proceeds |
mcmc_parameters |
a data frame of how we want to estimate (can be mcmc_superfast or mcmc_defaults) |
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