Description Usage Arguments Details Value
View source: R/loxcode_experiment.R
Create a loxcode_experiment from xlsx sample table.
| 1 2 3 4 5 6 7 8 9 10 | 
| name | string, name of the experiment | 
| s | string, path to user-specified Excel file containing experiment samples. | 
| dir | string, path to directory containing fastq files | 
| suffix_R1 | string, R1 suffix | 
| suffix_R2 | string, R2 suffix | 
| load | boolean, whether to load samples or not (default is TRUE) | 
| full | boolean, whether to produce full debugging output (default is FALSE, this uses significantly more memory) | 
| sat | boolean, whether to keep saturation info | 
Must contain the following columns:
* 'sample' – sample name. This is used as the unique identifier for the sample
* 'prefix' – sample prefix. suffix_R1 and suffix_R2 are appended to this
* 'meta' – sample metadata. This is user specified
* 'min_r1_len' – minimum R1 length
* 'min_r2_len' – minimum R2 length
loxcode_experiment object
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.