Files in jniedballa/camtrapR
Camera Trap Data Management and Preparation of Occupancy and Spatial Capture-Recapture Analyses
.Rbuildignore
.gitattributes
.github/FUNDING.yml
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
NEWS.md
R/OCRdataFields.R
R/_not_for_CRAN/build_github_page.R
R/_not_for_CRAN/rhub_checks.R
R/activityDensity.R
R/activityHistogram.R
R/activityOverlap.R
R/activityRadial.R
R/addCopyrightTag.R
R/addToPath.R
R/appendSpeciesNames.R
R/cameraOperation.R
R/camtrapR-package.R
R/checkSpeciesIdentification.R
R/checkSpeciesNames.R
R/communityModel.R
R/createSpeciesFolders.R
R/createStationFolders.R
R/detectionHistory.R
R/detectionMaps.R
R/exifTagNames.R
R/filterRecordTable.R
R/fixDateTimeOriginal.R
R/getSpeciesImages.R
R/imageRename.R
R/onAttach.R
R/plot.R
R/predict.R
R/recordTable.R
R/recordTableIndividual.R
R/spatialDetectionHistory.R
R/surveyDashboard.R
R/surveyReport.R
R/timeShiftImages.R
R/variousOtherHelperFunctions.R
R/variousPlottingHelperFunctions.R
R/writeDateTimeOriginal.R
README.Rmd
README.md
_pkgdown.yml
camtrapR.Rproj
data/camtraps.rda
data/camtrapsMultiSeason.rda
data/recordTableIndividualSample.rda
data/recordTableIndividualSampleMultiSeason.rda
data/recordTableSample.rda
data/recordTableSampleMultiSeason.rda
data/timeShiftTable.rda
docs/404.html
docs/articles/SpeciesID_digiKam.png
docs/articles/camtrapr1.html
docs/articles/camtrapr1_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/camtrapr1_files/header-attrs-2.11/header-attrs.js
docs/articles/camtrapr1_files/header-attrs-2.7/header-attrs.js
docs/articles/camtrapr2.html
docs/articles/camtrapr2_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/camtrapr2_files/header-attrs-2.11/header-attrs.js
docs/articles/camtrapr2_files/header-attrs-2.7/header-attrs.js
docs/articles/camtrapr3.html
docs/articles/camtrapr3_files/accessible-code-block-0.0.1/empty-anchor.js
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docs/articles/camtrapr4.html
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docs/articles/camtrapr4_files/header-attrs-2.11/header-attrs.js
docs/articles/camtrapr4_files/header-attrs-2.7/header-attrs.js
docs/articles/camtrapr5.html
docs/articles/camtrapr5_files/crosstalk-1.1.1/css/crosstalk.css
docs/articles/camtrapr5_files/crosstalk-1.1.1/js/crosstalk.js
docs/articles/camtrapr5_files/crosstalk-1.1.1/js/crosstalk.js.map
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docs/articles/camtrapr5_files/crosstalk-1.1.1/js/crosstalk.min.js.map
docs/articles/camtrapr5_files/crosstalk-1.2.0/css/crosstalk.min.css
docs/articles/camtrapr5_files/crosstalk-1.2.0/js/crosstalk.js
docs/articles/camtrapr5_files/crosstalk-1.2.0/js/crosstalk.js.map
docs/articles/camtrapr5_files/crosstalk-1.2.0/js/crosstalk.min.js
docs/articles/camtrapr5_files/crosstalk-1.2.0/js/crosstalk.min.js.map
docs/articles/camtrapr5_files/crosstalk-1.2.0/scss/crosstalk.scss
docs/articles/camtrapr5_files/datatables-binding-0.19/datatables.js
docs/articles/camtrapr5_files/datatables-binding-0.20/datatables.js
docs/articles/camtrapr5_files/datatables-binding-0.23/datatables.js
docs/articles/camtrapr5_files/datatables-binding-0.26/datatables.js
docs/articles/camtrapr5_files/datatables-binding-0.27/datatables.js
docs/articles/camtrapr5_files/datatables-binding-0.30/datatables.js
docs/articles/camtrapr5_files/datatables-css-0.0.0/datatables-crosstalk.css
docs/articles/camtrapr5_files/dt-core-1.10.20/css/jquery.dataTables.extra.css
docs/articles/camtrapr5_files/dt-core-1.10.20/css/jquery.dataTables.min.css
docs/articles/camtrapr5_files/dt-core-1.10.20/js/jquery.dataTables.min.js
docs/articles/camtrapr5_files/dt-core-1.11.3/css/jquery.dataTables.extra.css
docs/articles/camtrapr5_files/dt-core-1.11.3/css/jquery.dataTables.min.css
docs/articles/camtrapr5_files/dt-core-1.11.3/js/jquery.dataTables.min.js
docs/articles/camtrapr5_files/dt-core-1.12.1/css/jquery.dataTables.extra.css
docs/articles/camtrapr5_files/dt-core-1.12.1/css/jquery.dataTables.min.css
docs/articles/camtrapr5_files/dt-core-1.12.1/js/jquery.dataTables.min.js
docs/articles/camtrapr5_files/dt-core-1.13.4/css/jquery.dataTables.extra.css
docs/articles/camtrapr5_files/dt-core-1.13.4/css/jquery.dataTables.min.css
docs/articles/camtrapr5_files/dt-core-1.13.4/js/jquery.dataTables.min.js
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docs/articles/camtrapr5_files/header-attrs-2.11/header-attrs.js
docs/articles/camtrapr5_files/htmlwidgets-1.5.4/htmlwidgets.js
docs/articles/camtrapr5_files/htmlwidgets-1.6.1/htmlwidgets.js
docs/articles/camtrapr5_files/htmlwidgets-1.6.2/htmlwidgets.js
docs/articles/camtrapr5_files/jquery-3.6.0/jquery-3.6.0.js
docs/articles/camtrapr5_files/jquery-3.6.0/jquery-3.6.0.min.js
docs/articles/camtrapr5_files/jquery-3.6.0/jquery-3.6.0.min.map
docs/articles/index.html
docs/articles/mapview_example.png
docs/authors.html
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/OCRdataFields.html
docs/reference/Rplot001.png
docs/reference/Rplot002.png
docs/reference/Rplot003.png
docs/reference/Rplot004.png
docs/reference/Rplot005.png
docs/reference/Rplot006.png
docs/reference/Rplot007.png
docs/reference/Rplot008.png
docs/reference/Rplot009.png
docs/reference/activityDensity-1.png
docs/reference/activityDensity-2.png
docs/reference/activityDensity-3.png
docs/reference/activityDensity-4.png
docs/reference/activityDensity-5.png
docs/reference/activityDensity-6.png
docs/reference/activityDensity.html
docs/reference/activityHistogram-1.png
docs/reference/activityHistogram.html
docs/reference/activityOverlap-1.png
docs/reference/activityOverlap-2.png
docs/reference/activityOverlap.html
docs/reference/activityRadial-1.png
docs/reference/activityRadial-2.png
docs/reference/activityRadial.html
docs/reference/addCopyrightTag.html
docs/reference/addToPath.html
docs/reference/appendSpeciesNames.html
docs/reference/cameraOperation.html
docs/reference/camtrapR-package.html
docs/reference/camtraps.html
docs/reference/camtrapsMultiSeason.html
docs/reference/checkSpeciesIdentification.html
docs/reference/checkSpeciesNames.html
docs/reference/commOccu-class.html
docs/reference/communityModel.html
docs/reference/createSpeciesFolders.html
docs/reference/createStationFolders.html
docs/reference/detectionHistory.html
docs/reference/detectionMaps-1.png
docs/reference/detectionMaps-2.png
docs/reference/detectionMaps-3.png
docs/reference/detectionMaps-4.png
docs/reference/detectionMaps-5.png
docs/reference/detectionMaps-6.png
docs/reference/detectionMaps-7.png
docs/reference/detectionMaps-8.png
docs/reference/detectionMaps-9.png
docs/reference/detectionMaps.html
docs/reference/exifTagNames.html
docs/reference/exiftoolPath.html
docs/reference/filterRecordTable.html
docs/reference/fit-commOccu-method.html
docs/reference/fixDateTimeOriginal.html
docs/reference/getSpeciesImages.html
docs/reference/imageRename.html
docs/reference/index.html
docs/reference/plot-commOccu-method.html
docs/reference/plot_coef-commOccu-method.html
docs/reference/plot_effects-commOccu-method.html
docs/reference/predict-commOccu-method.html
docs/reference/recordTable.html
docs/reference/recordTableIndividual.html
docs/reference/recordTableIndividualSample.html
docs/reference/recordTableIndividualSampleMultiSeason.html
docs/reference/recordTableSample.html
docs/reference/recordTableSampleMultiSeason.html
docs/reference/spatialDetectionHistory-1.png
docs/reference/spatialDetectionHistory-2.png
docs/reference/spatialDetectionHistory-3.png
docs/reference/spatialDetectionHistory.html
docs/reference/summary-commOccu-method.html
docs/reference/surveyDashboard.html
docs/reference/surveyReport.html
docs/reference/timeShiftImages.html
docs/reference/timeShiftTable.html
docs/reference/writeDateTimeOriginal.html
inst/CITATION
inst/pictures/full_size_for_ocr/StationA/mousedeer.JPG
inst/pictures/raw_images/StationA/IMG0001.JPG
inst/pictures/raw_images/StationA/IMG0002.JPG
inst/pictures/raw_images/StationA/IMG0003.JPG
inst/pictures/raw_images/StationB/IMG0001.JPG
inst/pictures/raw_images/StationB/IMG0002.JPG
inst/pictures/raw_images/StationB/IMG0003.JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationA__2009-04-21__00-40-00(1).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationA__2009-04-22__20-19-00(1).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationA__2009-04-22__20-21-00(1).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationA__2009-04-23__00-07-00(1).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationA__2009-04-23__00-09-00(1).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationA__2009-05-07__17-11-00(1).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationB__2009-04-05__00-11-00(1).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationB__2009-04-05__23-13-00(1).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationB__2009-04-07__00-23-00(1).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationB__2009-04-10__04-07-00(1).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationB__2009-04-10__04-08-00(1).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationB__2009-04-14__06-13-00(1).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationB__2009-04-24__22-54-00(1).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationB__2009-04-25__04-33-00(1).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationB__2009-04-25__04-33-00(2).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationB__2009-05-14__02-11-00(1).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationC__2009-04-06__03-00-00(1).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationC__2009-04-06__03-00-00(2).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationC__2009-04-14__23-30-00(1).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationC__2009-04-14__23-30-00(2).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationC__2009-04-18__22-57-00(1).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationC__2009-04-23__03-33-00(1).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationC__2009-04-23__03-34-00(1).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationC__2009-05-05__18-24-00(1).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationC__2009-05-05__18-25-00(1).JPG
inst/pictures/sample_images_indiv_tag/LeopardCat/StationC__2009-05-07__18-47-00(1).JPG
inst/pictures/sample_images_species_dir/StationA/PBE/StationA__2009-04-21__00-40-00(1).JPG
inst/pictures/sample_images_species_dir/StationA/PBE/StationA__2009-04-22__20-19-00(1).JPG
inst/pictures/sample_images_species_dir/StationA/PBE/StationA__2009-04-22__20-21-00(1).JPG
inst/pictures/sample_images_species_dir/StationA/PBE/StationA__2009-04-23__00-07-00(1).JPG
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inst/pictures/sample_images_species_dir/StationA/VTA/StationA__2009-04-10__05-07-00(1).JPG
inst/pictures/sample_images_species_dir/StationA/VTA/StationA__2009-05-06__19-06-00(1).JPG
inst/pictures/sample_images_species_dir/StationB/MNE/StationB__2009-04-15__07-21-00(1).JPG
inst/pictures/sample_images_species_dir/StationB/MNE/StationB__2009-04-15__07-23-00(1).JPG
inst/pictures/sample_images_species_dir/StationB/MNE/StationB__2009-04-28__17-47-00(1).JPG
inst/pictures/sample_images_species_dir/StationB/MNE/StationB__2009-04-28__17-47-00(2).JPG
inst/pictures/sample_images_species_dir/StationB/MNE/StationB__2009-04-28__17-48-00(1).JPG
inst/pictures/sample_images_species_dir/StationB/MNE/StationB__2009-04-28__17-48-00(2).JPG
inst/pictures/sample_images_species_dir/StationB/MNE/StationB__2009-04-28__17-48-00(3).JPG
inst/pictures/sample_images_species_dir/StationB/MNE/StationB__2009-04-28__17-49-00(1).JPG
inst/pictures/sample_images_species_dir/StationB/MNE/StationB__2009-04-28__17-49-00(2).JPG
inst/pictures/sample_images_species_dir/StationB/MNE/StationB__2009-04-28__17-49-00(3).JPG
inst/pictures/sample_images_species_dir/StationB/PBE/StationB__2009-04-05__00-11-00(1).JPG
inst/pictures/sample_images_species_dir/StationB/PBE/StationB__2009-04-05__23-13-00(1).JPG
inst/pictures/sample_images_species_dir/StationB/PBE/StationB__2009-04-07__00-23-00(1).JPG
inst/pictures/sample_images_species_dir/StationB/PBE/StationB__2009-04-10__04-07-00(1).JPG
inst/pictures/sample_images_species_dir/StationB/PBE/StationB__2009-04-10__04-08-00(1).JPG
inst/pictures/sample_images_species_dir/StationB/PBE/StationB__2009-04-14__06-13-00(1).JPG
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man/OCRdataFields.Rd
man/activityDensity.Rd
man/activityHistogram.Rd
man/activityOverlap.Rd
man/activityRadial.Rd
man/addCopyrightTag.Rd
man/addToPath.Rd
man/appendSpeciesNames.Rd
man/cameraOperation.Rd
man/camtrapR-package.Rd
man/camtraps.Rd
man/camtrapsMultiSeason.Rd
man/checkSpeciesIdentification.Rd
man/checkSpeciesNames.Rd
man/commOccu-class.Rd
man/communityModel.Rd
man/createSpeciesFolders.Rd
man/createStationFolders.Rd
man/detectionHistory.Rd
man/detectionMaps.Rd
man/exifTagNames.Rd
man/filterRecordTable.Rd
man/fit-commOccu-method.Rd
man/fixDateTimeOriginal.Rd
man/getSpeciesImages.Rd
man/imageRename.Rd
man/plot_coef-commOccu-method.Rd
man/plot_effects-commOccu-method.Rd
man/predict-commOccu-method.Rd
man/recordTable.Rd
man/recordTableIndividual.Rd
man/recordTableIndividualSample.Rd
man/recordTableIndividualSampleMultiSeason.Rd
man/recordTableSample.Rd
man/recordTableSampleMultiSeason.Rd
man/spatialDetectionHistory.Rd
man/summary-commOccu-method.Rd
man/surveyDashboard.Rd
man/surveyReport.Rd
man/timeShiftImages.Rd
man/timeShiftTable.Rd
man/writeDateTimeOriginal.Rd
tests/test-all.R
tests/testthat/test_cameraOperation.R
tests/testthat/test_detectionHistory.R
tests/testthat/test_imageRename.R
tests/testthat/test_recordTable.R
tests/testthat/test_surveyReport.R
vignettes/SpeciesID_digiKam.png
vignettes/camtrapr1.Rmd
vignettes/camtrapr1.pdf
vignettes/camtrapr1.pdf.asis
vignettes/camtrapr2.Rmd
vignettes/camtrapr2.pdf
vignettes/camtrapr2.pdf.asis
vignettes/camtrapr3.Rmd
vignettes/camtrapr3.pdf
vignettes/camtrapr3.pdf.asis
vignettes/camtrapr4.Rmd
vignettes/camtrapr4.pdf
vignettes/camtrapr4.pdf.asis
vignettes/camtrapr5.Rmd
vignettes/camtrapr5.html
vignettes/camtrapr5.html.asis
vignettes/mapview_example.png
