Man pages for jnikelski/rmincIO
Package for reading and writing MINC2 files
| civet.checkVersion | Check for a known Civet Version |
| civet.computeNativeToStxRescalingFactor | Compute Native to Stereotactic Rescaling Factor |
| civet.computeTissueVolumes | Compute GM, WM, and CSF Tissue Volumes |
| civet.getFilename | Get Selected Civet Filenames |
| civet.readCivetDatFiles | Read Civet-Generated Dat Files |
| MincInfo-class | Class "MincInfo" |
| mincIO.asVolume-methods | Convert a 3D-Array into a 3D Minc Volume Object |
| mincIO.getProperty-methods | Get a specified property from a mincIO object |
| mincIO.getSliceFromSliceArray-methods | Methods to Get a Slice from a MincSliceIO Object |
| mincIO.getSliceXYZ-methods | Methods to Get a Slice from a MincVolumeIO Object |
| mincIO.makeNewSliceZ-methods | Method to Create an Axial Slice from a MincVolumeIO Object |
| mincIO.makeNewVolume-methods | Methods to create a new, empty 3D Minc volume object |
| mincIO.plot-methods | Methods to Plot Minc Images |
| mincIO.plotSlicePretty | Display a 2D Image Plot |
| mincIO.print-methods | Methods to Print Minc Summary Information |
| mincIO.printMincInfo | Print a MincInfo Object |
| mincIO.putSlice-methods | Methods to Transfer a Slice into a MincVolumeIO Object |
| mincIO.readBySlice-methods | Methods to Read a Specific Slice Across all Frames or Volumes |
| mincIO.readByVoxel-methods | Methods to Read a Single Voxel over Multiple Frames and... |
| mincIO.readMincInfo | Initialize a MincInfo Object from a Valid Minc Volume |
| mincIO.readVolume-methods | Methods to Read a 3D Volume or a Single 4D Frame |
| mincIO.setProperty-methods | Set a specified property from a mincIO object |
| mincIO.writeVolume-methods | Methods to Write a 3D Volume |
| MincSlice-class | Class "MincSlice" |
| MincSliceIO-class | Class "MincSliceIO" |
| MincVolumeIO-class | Class "MincVolumeIO" |
| MincVoxelIO-class | Class "MincVoxelIO" |
| rmincIO-internal | Internal rmincIO objects |
| rmincIO-package | Read and Write MINC2 Volumes Using S4 Objects |
| rmincUtil.asMinc2 | Convert Volume to Minc2 Format |
| rmincUtil.checkForExternalProgram | Check the Availability of an External Program or Script |
| rmincUtil.convertVoxelToWorld | Convert Voxel to World Coordinates |
| rmincUtil.convertWorldToVoxel | Convert World to Voxel Coordinates |
| rmincUtil.getDataClassCode | Get a Data Class Numeric Code |
| rmincUtil.getDataClasses | Get Minc2 Data Classes |
| rmincUtil.getDataTypeCode | Get a Data Type Numeric Code |
| rmincUtil.getDataTypes | Get Minc2 Data Types |
| rmincUtil.isMinc | Check File For Minc Volume Format |
| rmincUtil.isMinc1 | Test File For Minc1 Volume Format |
| rmincUtil.isMinc2 | Test File For Minc2 Volume Format |
| rmincUtil.isReadable | Check Read Permissions for Files |
| rmincUtil.readLinearXfmFile | Read a Linear XFM File |
| volume.combineMaskVolumes | Combine Multiple Mask Volumes into a Single Mask Volume |
| volume.explodeLabelVolume | Explode a Label Volume into its Components |
