MincSliceIO-class: Class "MincSliceIO"

In jnikelski/rmincIO: Package for reading and writing MINC2 files

Description

This class permits the loading of volume data at slice granularity. That is, rather than reading an entire 3D volume, this class allows the user to define a specific slice number that is to be read either across all frames of a 4D volume, or across all volumes of a series of 3D volumes.

Objects from the Class

Objects can be created by calls of the form new("MincSliceIO", data, nrow, ncol, byrow, dimnames, ...), however, users are not expected to instantiate these objects directly. More conveniently, these objects are usually created by calls to mincIO.readBySlice.

Slots

.Data:

Object of class "matrix"

mincInfo:

Object of class "MincInfo"

sliceNumber:

Object of class "numeric"

orientation:

Object of class "character"

nSlices:

Object of class "numeric"

sliceOrigin:

Object of class "character"

filenames:

Object of class "character"

volumeType:

Object of class "character"

colorMap:

Object of class "character"

Extends

Class "matrix", from data part. Class "array", by class "matrix", distance 2. Class "structure", by class "matrix", distance 3. Class "vector", by class "matrix", distance 4, with explicit coerce.

Methods

mincIO.getSliceFromSliceArray

signature(mincSliceMatrix = "MincSliceIO"): ...

print

signature(x = "MincSliceIO"): ...

show

signature(object = "MincSliceIO"): ...

Author(s)

Jim Nikelski [e-mail]

See Also

MincInfo MincSlice MincVolumeIO

Examples

showClass("MincSliceIO")

jnikelski/rmincIO documentation built on May 19, 2019, 2:58 p.m.