API for jnikelski/rmincIO
Package for reading and writing MINC2 files

Global functions
*,MincVolumeIO,MincVolumeIO-method Man page
+,MincVolumeIO,MincVolumeIO-method Man page
-,MincVolumeIO,MincVolumeIO-method Man page
.First.lib Man page
.Last.lib Man page
.requireCachedGenerics Man page
/,MincVolumeIO,MincVolumeIO-method Man page
MincInfo Man page
MincInfo-class Man page
MincSlice Man page
MincSlice-class Man page
MincSliceIO Man page
MincSliceIO-class Man page
MincVolumeIO Man page
MincVolumeIO-class Man page
MincVoxelIO Man page
MincVoxelIO-class Man page
[.pdMat Man page
[.reStruct Man page
[<-.pdMat Man page
anatApply Man page
anatCombineStructures Man page
anatCreateVolume Man page
anatFDR Man page
anatGetAll Man page
anatGetFile Man page
anatLm Man page
anatRenameRows Man page
as.matrix.pdMat Man page
as.matrix.reStruct Man page
ast.lib Source code
civet.AllROIs Man page
civet.accessorIsImplemented Source code
civet.checkVersion Man page Source code
civet.computeNativeTissueVolumes Man page Source code
civet.computeNativeToStxRescalingFactor Man page Source code
civet.computeStxTissueVolumes Man page Source code
civet.getAllFilenames Man page
civet.getDirname Source code
civet.getDirnameClassify Source code
civet.getDirnameFinal Source code
civet.getDirnameLogs Source code
civet.getDirnameMask Source code
civet.getDirnameNative Source code
civet.getDirnameSurfaces Source code
civet.getDirnameThickness Source code
civet.getDirnameTransforms Source code
civet.getDirnameTransformsLinear Source code
civet.getDirnameTransformsNonlinear Source code
civet.getDirnameVbm Source code
civet.getDirnameVerify Source code
civet.getFilename Source code
civet.getFilenameCerebrumMask Man page Source code
civet.getFilenameClassify Man page Source code
civet.getFilenameCorticalThickness Man page Source code
civet.getFilenameCsfPve Man page Source code
civet.getFilenameGrayMatterPve Man page Source code
civet.getFilenameGrayMatterSurfaces Man page Source code
civet.getFilenameLinearTransform Man page Source code
civet.getFilenameMeanSurfaceCurvature Man page Source code
civet.getFilenameMidSurfaces Man page Source code
civet.getFilenameNative Source code
civet.getFilenameNativeNUC Source code
civet.getFilenameNonlinearTransform Man page Source code
civet.getFilenameSkullMask Man page Source code
civet.getFilenameSkullMaskNative Source code
civet.getFilenameStxT1 Man page Source code
civet.getFilenameVbmBlurred Source code
civet.getFilenameWhiteMatterPve Man page Source code
civet.getFilenameWhiteMatterSurfaces Man page Source code
civet.getScanDirectoryName Source code
civet.processArgsOpt Source code
civet.processArgsSettings Source code
civet.readCivetDatFiles Man page Source code
civetAllROIs Man page
civetFilenames Man page
coef.modelStruct Man page
corMatrix.pdMat Man page
corMatrix.reStruct Man page
f Man page
fast.qvalue Man page
fitted.lme Man page
fitted.rmincLmeStruct Man page
fixef.lme Man page
formula.lme Man page
formula.modelStruct Man page
formula.pdMat Man page
logDet.newpdNatural Man page
logDet.pdMat Man page
logDet.pdSymm Man page
logLik.reStruct Man page
logLik.rmincLme Man page
logLik.rmincLmeStruct Man page
logLik.rmincLmeStructInt Man page
minc.get.hyperslab2 Man page
minc.get.slices Man page
minc.get.volumes Man page
minc.slice.loop Man page
minc.t.test Man page
minc.wilcoxon.test Man page
mincAnova Man page
mincApply Man page
mincApplyLme Man page
mincConvertVoxelToWorld Man page
mincConvertWorldToVoxel Man page
mincFileCheck Man page
mincGetMask Man page
mincGetVector Man page
mincGetVoxel Man page
mincGetWorldVoxel Man page
mincIO.asVolume Man page
mincIO.asVolume,array,MincVolumeIO,missing-method Man page
mincIO.asVolume,array,missing,character-method Man page
mincIO.asVolume-methods Man page
mincIO.getProperty Man page
mincIO.getProperty,MincInfo,character-method Man page
mincIO.getProperty,MincSlice,character-method Man page
mincIO.getProperty,MincSliceIO,character-method Man page
mincIO.getProperty,MincVolumeIO,character-method Man page
mincIO.getProperty,MincVoxelIO,character-method Man page
mincIO.getProperty-methods Man page
mincIO.getSliceFromSliceArray Man page
mincIO.getSliceFromSliceArray,MincSliceIO-method Man page
mincIO.getSliceFromSliceArray-methods Man page
mincIO.getSliceX Man page
mincIO.getSliceX,MincVolumeIO-method Man page
mincIO.getSliceX-methods Man page
mincIO.getSliceXYZ Man page
mincIO.getSliceY Man page
mincIO.getSliceY,MincVolumeIO-method Man page
mincIO.getSliceY-methods Man page
mincIO.getSliceZ Man page
mincIO.getSliceZ,MincVolumeIO-method Man page
mincIO.getSliceZ-methods Man page
mincIO.makeNewSliceZ Man page
mincIO.makeNewSliceZ,MincVolumeIO-method Man page
mincIO.makeNewSliceZ-methods Man page
mincIO.makeNewVolume Man page
mincIO.makeNewVolume,character,missing,missing,missing,character Man page
mincIO.makeNewVolume,character,missing,missing,missing,missing,c Man page
mincIO.makeNewVolume,character,numeric,numeric,numeric,missing,m Man page
mincIO.makeNewVolume-methods Man page
mincIO.makeNewVolumeX Man page Source code
mincIO.plotSlicePretty Man page Source code
mincIO.print-methods Man page
mincIO.printMincInfo Man page Source code
mincIO.putSlice Man page
mincIO.putSlice,MincSlice,MincVolumeIO-method Man page
mincIO.putSlice-methods Man page
mincIO.readBySlice Man page
mincIO.readBySlice,character,numeric-method Man page
mincIO.readBySlice-methods Man page
mincIO.readByVoxel Man page
mincIO.readByVoxel,character-method Man page
mincIO.readByVoxel-methods Man page
mincIO.readByVoxelX Man page Source code
mincIO.readMincInfo Man page Source code
mincIO.readVolume Man page
mincIO.readVolume,MincInfo-method Man page
mincIO.readVolume,character-method Man page
mincIO.readVolume-methods Man page
mincIO.readVolumeX Man page Source code
mincIO.setProperty Man page
mincIO.setProperty,MincInfo,character-method Man page
mincIO.setProperty,MincSlice,character-method Man page
mincIO.setProperty,MincSliceIO,character-method Man page
mincIO.setProperty,MincVolumeIO,character-method Man page
mincIO.setProperty,MincVoxelIO,character-method Man page
mincIO.setProperty-methods Man page
mincIO.writeVolume Man page
mincIO.writeVolume,MincVolumeIO-method Man page
mincIO.writeVolume-methods Man page
mincIO.writeVolumeX Man page Source code
mincSlowLme Man page
mincSummary Man page
mincWriteVolume.default Man page
model.matrix.reStruct Man page
needUpdate.modelStruct Man page
needUpdate.reStruct Man page
newACF Man page
newBIC Man page
newBIC.lm Man page
newBIC.logLik Man page
newDim Man page
newDim.default Man page
newDim.newpdNatural Man page
newDim.pdMat Man page
newDim.pdSymm Man page
newInitialize Man page
newInitialize.reStruct Man page
newInitialize.rmincLmeStruct Man page
newMEEM Man page
newMEdecomp Man page
newMEdims Man page
newMEestimate Man page
newNames Man page
newNames.formula Man page
newNames.pdMat Man page
newNames.reStruct Man page
newNames<- Man page
newNames<-.pdMat Man page
newNames<-.reStruct Man page
newVariogram Man page
newallVarsRec Man page
newasOneFormula Man page
newasTable Man page
newaugPred Man page
newcoef.newpdNatural Man page
newcoef.pdMat Man page
newcoef.pdSymm Man page
newcoef.reStruct Man page
newcoef<- Man page
newcoef<-.modelStruct Man page
newcoef<-.pdMat Man page
newcoef<-.reStruct Man page
newcoefficients<- Man page
newcollapse Man page
newcomparePred Man page
newcovariate<- Man page
newfdHess Man page
newfixed.effects Man page
newfixef Man page
newformula.reStruct Man page
newgetCovariate Man page
newgetCovariate.data.frame Man page
newgetCovariateFormula Man page
newgetData Man page
newgetFixDF Man page
newgetGroups Man page
newgetGroups.data.frame Man page
newgetGroups.lme Man page
newgetGroupsFormula Man page
newgetGroupsFormula.default Man page
newgetGroupsFormula.lme Man page
newgetGroupsFormula.reStruct Man page
newgetResponseFormula Man page
newintervals Man page
newisBalanced Man page
newisInitialized Man page
newisInitialized.pdMat Man page
newisInitialized.reStruct Man page
newlogDet Man page
newlogDet.reStruct Man page
newmatrix<- Man page
newmatrix<-.pdMat Man page
newmatrix<-.reStruct Man page
newneedUpdate Man page
newneedUpdate.default Man page
newpdConstruct Man page
newpdConstruct.newpdLogChol Man page
newpdConstruct.newpdNatural Man page
newpdConstruct.pdMat Man page
newpdConstruct.pdSymm Man page
newpdFactor Man page
newpdFactor.newpdLogChol Man page
newpdFactor.newpdNatural Man page
newpdFactor.pdMat Man page
newpdFactor.pdSymm Man page
newpdFactor.reStruct Man page
newpdLogChol Man page
newpdMatrix Man page
newpdMatrix.newpdNatural Man page
newpdMatrix.pdMat Man page
newpdMatrix.pdSymm Man page
newpdMatrix.reStruct Man page
newpdNatural Man page
newrandom.effects Man page
newranef Man page
newrecalc Man page
newrecalc.modelStruct Man page
newrecalc.reStruct Man page
newsplitFormula Man page
newvarFunc Man page
newvarWeights Man page
onAttach Source code
onLoad Source code
pdMat Man page
pdSymm Man page
plot,MincSlice,ANY-method Man page
plot,MincSlice-method Man page
plot,MincVolumeIO,ANY-method Man page
plot,MincVolumeIO-method Man page
plot-methods Man page
plot.pdMat Man page
print,MincInfo-method Man page
print,MincSlice-method Man page
print,MincSliceIO-method Man page
print,MincVolumeIO-method Man page
print,MincVoxelIO-method Man page
print-methods Man page
print.anatMatrix Man page
print.correlation Man page
print.mincMultiDim Man page
print.mincQvals Man page
print.mincSingleDim Man page
print.mincVoxel Man page
print.modelStruct Man page
print.pdMat Man page
print.reStruct Man page
print.rmincLme Man page
print.summary.lme Man page
print.summary.modelStruct Man page
print.summary.pdMat Man page
print.vertexMultiDim Man page
pt2 Man page
reStruct Man page
residuals.rmincLmeStruct Man page
rmincIO Man page
rmincIO-package Man page
rmincLme Man page
rmincLme.formula Man page
rmincLmeApVar Man page
rmincLmeControl Man page
rmincLmeLoop Man page
rmincLmeScale Man page
rmincLmeStruct Man page
rmincUtil.asMinc2 Man page Source code
rmincUtil.asMniObjAscii Source code
rmincUtil.checkForExternalProgram Man page Source code
rmincUtil.convertVoxelToWorld Man page Source code
rmincUtil.convertWorldToVoxel Man page Source code
rmincUtil.getDataClassCode Man page Source code
rmincUtil.getDataClasses Man page Source code
rmincUtil.getDataTypeCode Man page Source code
rmincUtil.getDataTypes Man page Source code
rmincUtil.getVolumeDimnames Source code
rmincUtil.isMinc Man page Source code
rmincUtil.isMinc1 Man page Source code
rmincUtil.isMinc2 Man page Source code
rmincUtil.isMniObj Source code
rmincUtil.isMniObjAscii Source code
rmincUtil.isMniObjBinary Source code
rmincUtil.isReadable Man page Source code
rmincUtil.readLinearXfmFile Man page Source code
show,MincInfo-method Man page
show,MincSlice-method Man page
show,MincSliceIO-method Man page
show,MincVolumeIO-method Man page
show,MincVoxelIO-method Man page
show-methods Man page
solve.newpdLogChol Man page
solve.newpdNatural Man page
solve.pdMat Man page
solve.pdSymm Man page
solve.reStruct Man page
summary.modelStruct Man page
summary.newpdLogChol Man page
summary.newpdNatural Man page
summary.pdMat Man page
summary.pdSymm Man page
summary.reStruct Man page
summary.rmincLme Man page
update.modelStruct Man page
update.reStruct Man page
update.rmincLme Man page
varWeights.rmincLmeStruct Man page
varWeights.varFunc Man page
vertexFDR Man page
vertexLm Man page
vertexTable Man page
volume.combineMaskVolumes Man page Source code
volume.explodeLabelVolume Man page Source code
wilcox.permutation Man page
wilcox.permutation.full Man page
jnikelski/rmincIO documentation built on April 9, 2018, 4:11 p.m.