Description Usage Arguments Value
make grid for enrichment scan.
1 2 |
fraglen |
Integer indicating the average DNA fragment length in bp |
rlen |
Integer indicating the read length in bp |
path |
Path to alignement files. |
chr |
Integer specifying which chromosme to limit analysis to. |
min_win |
Integer indicating the minimum window size to be used in constructing grid |
max_win |
Integer indicating the maximum window size to be used in constructing grid |
blocksize |
Integer indicating how large of a chunk of the chromosome will be analyzed at a time |
grid.
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