README.md

In joelpick/measuRe: Measure length and area from images

measuRe v0.0.0.9000

Measure length and area from images in R

Installation

devtools::install_github("joelpick/measuRe")

library(measuRe)

Usage

In order to bring up the UI you need to run the "measuRe" function:

all_data <- measuRe("folder path where images are located")

The application runs best in standalone R, though if you add x11 = T it'll run fine in R Studio.

After you've measured all images:

extract_length/extract_area(all_data) to extract length/area for each object within an image measured in total number of pixels.

Application

Prev: Previous image in folder.

Next: Next image in folder. When the image is the last in the list, the application will close.

Add: Allows for measuring of more than one object per image.

Zoom: Zoom in on a part of image by clicking the Zoom button and then the top left and bottom right around the point of interest.

Zoom Out: Return the image to the original size pre-zoom.

Delete Item: Allows for removal of one object.

Delete All: Removes all points from the image.

Finish: Closes the window and saves a R datafile with existing coordinates.

The number in the bottom right denotes which image you are currently working on/total number of images within the folder path.

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joelpick/measuRe documentation built on Sept. 29, 2020, 11:53 p.m.