R/MakeDB.R

In johnathanlo/chromPaintR: In-Silico Chromosome Painting

Defines functions MakeDB

Documented in MakeDB

MakeDB <- function(dbtype = "nucl", fsa_file){
  syscommand <- paste("makeblastdb -in ", fsa_file, " -dbtype ", dbtype, " -parse_seqids", sep = "")
  system(syscommand)
}