library(methods)
library(dplyr)
library(tidyr)
library(readxl)
library(dembase)
denominator <- 100
china_deaths_un <- read_xlsx("data-raw/china_deaths_un/NumberDeaths-20171201121407.xlsx",
sheet = 2,
skip = 1) %>%
filter(Location == "China") %>%
gather(key = "age", value = "count", `0-4`:`95+`) %>%
select(age = age, sex = Sex, time = Time, count) %>%
extract(col = time, into = c("start", "stop"), regex = "([:digit:]+) - ([:digit:]+)", convert = TRUE) %>%
mutate(start = start + 1) %>% ## NEED TO CHANGE THIS AFTER FINISHING CHANGES TO DEMBASE
unite(col = time, start, stop, sep = "-", remove = TRUE) %>%
mutate(count = (1000 / denominator) * count) %>%
xtabs(count ~ age + time, .) %>%
Counts() %>%
collapseIntervals(dimension = "age", breaks = seq(0, 80, 5)) %>%
toInteger(force = TRUE) %>%
as.array()
save(china_deaths_un,
file = "data/china_deaths_un.rda")
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