Files in jokergoo/CePa
Centrality-Based Pathway Enrichment
.DS_Store
.Rbuildignore
.gitignore
CHANGES
DESCRIPTION
NAMESPACE
R/.DS_Store
R/centrality.R
R/cepa.all.R
R/data.R
R/expression.R
R/get_result.R
R/global_variable.R
R/ora_extension.R
R/overview.R
R/pathway.R
R/plot_print.R
R/report.R
R/univariate_extension.R
README.md
data/PID.db.rda
data/datalist
data/gene.list.rda
docs/404.html
docs/authors.html
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/index.html
inst/.DS_Store
inst/extdata/bk.genome
inst/extdata/cepa.template
inst/extdata/js/AC_OETags.min.js
inst/extdata/js/cytoscapeweb.min.js
inst/extdata/js/json2.min.js
inst/extdata/js/main.js
inst/extdata/swf/CytoscapeWeb.swf
inst/extdata/swf/playerProductInstall.swf
man/.DS_Store
man/CePa-package.Rd
man/PID.db.Rd
man/cepa.Rd
man/cepa.all.Rd
man/cepa.all.parallel.Rd
man/cepa.ora.Rd
man/cepa.ora.all.Rd
man/cepa.univariate.Rd
man/cepa.univariate.all.Rd
man/gene.list.Rd
man/generate.pathway.Rd
man/get.cepa.Rd
man/p.table.Rd
man/pathway.nodes.Rd
man/plot.cepa.Rd
man/plot.cepa.all.Rd
man/plot.pathway.catalogue.Rd
man/plotGraph.Rd
man/plotNull.Rd
man/print.cepa.Rd
man/print.cepa.all.Rd
man/print.pathway.catalogue.Rd
man/radiality.Rd
man/reach.Rd
man/read.cls.Rd
man/read.gct.Rd
man/report.Rd
man/sampleLabel.Rd
man/set.pathway.catalogue.Rd
man/spread.Rd
test/test_biopax.R
vignettes/CePa.Rnw
vignettes/analysis-p53.Rnw
vignettes/bibliography.bib
vignettes/f1.pdf
vignettes/f10.pdf
vignettes/f11.pdf
vignettes/f12.pdf
vignettes/f2.pdf
vignettes/f3.pdf
vignettes/f4.pdf
vignettes/f5.pdf
vignettes/f6.pdf
vignettes/f8.pdf
vignettes/f9.pdf
vignettes/fdr.pdf
vignettes/interaction-part.PNG
vignettes/levels.pdf
vignettes/molecule-part.PNG
vignettes/p53-null.pdf
vignettes/p53pathway.pdf
vignettes/parsing-PID-pathway-data.Rnw
vignettes/pathway-part.PNG
vignettes/ref.bib
