Description Usage Arguments Details Value Author(s) See Also Examples
View source: R/ora_extension.R
Apply centrality-extended ORA on a single pathway
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dif |
differential gene list |
pc |
a |
bk |
background gene list. If background gene list are not specified, use whole human genes |
pathway |
|
id |
identify which pathway in the catalogue |
cen |
centrality measuments, it can ce a string, function, or function that has been quoted |
cen.name |
centrality measurement names. This argument should be set if the |
iter |
number of simulations |
The function is always called by cepa.ora.all
. But you can still
use it if you realy want to analysis just one pathway under one centrality.
A cepa
class object
Zuguang Gu <z.gu@dkfz.de>
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