bjobs: Summary of jobs

In jokergoo/bsub: Submitter and Monitor of the 'LSF Cluster'

Summary of jobs

Description

Summary of jobs

Usage

bjobs(
  status = c("RUN", "PEND"),
  max = Inf,
  filter = NULL,
  print = TRUE,
  job_id = NULL
)

bjobs_raw(fields = "jobid stat job_name queue")

brecent(max = 20, filter = NULL)

bjobs_running(max = Inf, filter = NULL)

bjobs_pending(max = Inf, filter = NULL)

bjobs_done(max = Inf, filter = NULL)

bjobs_exit(max = Inf, filter = NULL)

Arguments

status	Status of the jobs. Use "all" for all status
max	Maximal number of recent jobs.
filter	Regular expression on job names.
print	Whether to print the table.
job_id	A single job ID, internally used.
fields	Supported output fields, check https://www.ibm.com/docs/en/spectrum-lsf/10.1.0?topic=information-customize-job-output. The value can be a vector of field names or a single string that already includes output fields separated by space.

Details

There is an additional column "RECENT" which is the order for the job with the same name. 1 means the most recent job.

You can directly type bjobs without parentheses which runs bjobs with defaults.

• brecent shows the most recent.

• bjobs_done shows the "DONE" jobs.

• bjobs_exit shows the "EXIT" jobs.

• bjobs_pending shows the "PEND" jobs.

• bjobs_running shows the "RUN" jobs.

bjobs_raw() returns the table from the original ⁠bsubs -a -o '...'⁠ call.

Value

A data frame with selected job summaries.

Examples

## Not run: 
bjobs # this is the same as bjobs()
bjobs() # all running and pending jobs
bjobs(status = "all") # all jobs
bjobs(status = "RUN") # all running jobs, you can also use `bjobs_running`
bjobs(status = "PEND") # all pending jobs, you can also use `bjobs_pending`
bjobs(status = "DONE") # all done jobs, you can also use `bjobs_done`
bjobs(status = "EXIT") # all exit jobs, you can also use `bjobs_exit`
bjobs(status = "all", max = 20) # last 20 jobs
bjobs(status = "DONE", filter = "example") # done jobs with name '.*example.*'

## End(Not run)
## Not run: 
brecent  # this is the same as `brecent()`
brecent() # last 20 jobs (from all status)
brecent(max = 50) # last 50 jobs
brecent(filter = "example") # last 20 jobs with name ".*example.*"

## End(Not run)
## Not run: 
bjobs_running  # this is the same as `bjobs_running()`
bjobs_running() # all running jobs
bjobs_running(max = 50) # last 50 running jobs
bjobs_running(filter = "example") # running jobs with name ".*example.*"

## End(Not run)
## Not run: 
bjobs_pending  # this is the same as `bjobs_pending()`
bjobs_pending() # all pending jobs
bjobs_pending(max = 50) # last 50 pending jobs
bjobs_pending(filter = "example") # pending jobs with name ".*example.*"

## End(Not run)
## Not run: 
bjobs_done  # this is the same as `bjobs_done()`
bjobs_done() # all done jobs
bjobs_done(max = 50) # last 50 done jobs
bjobs_done(filter = "example") # done jobs with name ".*example.*"

## End(Not run)
## Not run: 
bjobs_exit  # this is the same as `bjobs_exit()`
bjobs_exit() # all exit jobs
bjobs_exit(max = 50) # last 50 exit jobs
bjobs_exit(filter = "example") # exit jobs with name ".*example.*"

## End(Not run)

jokergoo/bsub documentation built on June 30, 2024, 5:16 p.m.