analyse_qpcr: analyse_qpcr
In jonathandesmedt92/RtqpcR: RtqpcR facilitates analysis and QC of RT-qPCR data.

Analyse qpcr data

analyse_qpcr(
  qpcr,
  reference_genes,
  levels = NULL,
  aggregation = c("geomean", "mean", "median")
)

`qpcr`	An instance of the qpcr class. Expression data and sample annotations must have been loaded already.
`reference_genes`	A vector listing the genes one wishes to use as housekeeping genes or reference genes.
`levels`	A list with the set levels for each factor in the sample annotation data. Defaults to NULL.
`aggregation`	Defines how CT values of technical replicates and reference genes should be aggregated; either by their arithmetic ('mean') or geometric mean ('geomean') or their median ('median').